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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
AT3G51910.1 |
| Common Name | AT-HSFA7A, F4F15.20, HSF09, HSFA7A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
HSF |
| Protein Properties |
Length: 272aa MW: 31776 Da PI: 6.4315 |
| Description |
heat shock transcription factor A7A |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 110.7 | 1e-34 | 30 | 120 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl+k++e+++d+++++++sw++ g+sfvv+d ++f++ +Lp++Fkhsnf+SF+RQLn+YgF+k++ e+ weF++++F g+++ll++ik
AT3G51910.1 30 FLTKTFEMVDDPNTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKHSNFSSFIRQLNTYGFRKIEAER---------WEFANEEFLLGQRQLLKNIK 117
9****************************************************************999.........******************** PP
XXX CS
HSF_DNA-bind 99 rkk 101
r++
AT3G51910.1 118 RRN 120
*97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009408 | Biological Process | response to heat |
| GO:0009644 | Biological Process | response to high light intensity |
| GO:0032268 | Biological Process | regulation of cellular protein metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD 60
LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF ANEEFLLGQR QLLKNIKRRN 120
PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS 180
FLARAMQSPS FLHQLLKQRD KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM 240
LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2ldu_A | 5e-24 | 28 | 119 | 18 | 120 | Heat shock factor protein 1 |
| 5d5u_B | 5e-24 | 28 | 119 | 27 | 129 | Heat shock factor protein 1 |
| 5d5v_B | 5e-24 | 28 | 119 | 27 | 129 | Heat shock factor protein 1 |
| 5d5v_D | 5e-24 | 28 | 119 | 27 | 129 | Heat shock factor protein 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| TAIR | member of Heat Stress Transcription Factor (Hsf) family |
| UniProt | Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AL049711 | 0.0 | AL049711.3 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15. |
| GenBank | CP002686 | 0.0 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Nover L, et al.
Arabidopsis and the heat stress transcription factor world: how many heat stress transcription factors do we need?
Cell Stress Chaperones, 2001. 6(3): p. 177-89
[PMID:11599559] - Port M, et al.
Role of Hsp17.4-CII as coregulator and cytoplasmic retention factor of tomato heat stress transcription factor HsfA2.
Plant Physiol., 2004. 135(3): p. 1457-70
[PMID:15247379] - Contento AL,Kim SJ,Bassham DC
Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation.
Plant Physiol., 2004. 135(4): p. 2330-47
[PMID:15310832] - Gieg
Coordination of nuclear and mitochondrial genome expression during mitochondrial biogenesis in Arabidopsis.
Plant Cell, 2005. 17(5): p. 1497-512
[PMID:15829605] - Vanderauwera S, et al.
Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis.
Plant Physiol., 2005. 139(2): p. 806-21
[PMID:16183842] - Vergnolle C, et al.
The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions.
Plant Physiol., 2005. 139(3): p. 1217-33
[PMID:16258011] - Xin Z,Zhao Y,Zheng ZL
Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis.
Plant Physiol., 2005. 139(3): p. 1350-65
[PMID:16258012] - Nicola
Large-scale analysis of mRNA translation states during sucrose starvation in arabidopsis cells identifies cell proliferation and chromatin structure as targets of translational control.
Plant Physiol., 2006. 141(2): p. 663-73
[PMID:16632591] - Nishizawa A, et al.
Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress.
Plant J., 2006. 48(4): p. 535-47
[PMID:17059409] - Charng YY, et al.
A heat-inducible transcription factor, HsfA2, is required for extension of acquired thermotolerance in Arabidopsis.
Plant Physiol., 2007. 143(1): p. 251-62
[PMID:17085506] - Larkindale J,Vierling E
Core genome responses involved in acclimation to high temperature.
Plant Physiol., 2008. 146(2): p. 748-61
[PMID:18055584] - Cartagena JA, et al.
The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen.
Dev. Biol., 2008. 315(2): p. 355-68
[PMID:18252252] - Guo J, et al.
Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis.
J Genet Genomics, 2008. 35(2): p. 105-18
[PMID:18407058] - Sugio A,Dreos R,Aparicio F,Maule AJ
The cytosolic protein response as a subcomponent of the wider heat shock response in Arabidopsis.
Plant Cell, 2009. 21(2): p. 642-54
[PMID:19244141] - Nishizawa-Yokoi A, et al.
HsfA1d and HsfA1e involved in the transcriptional regulation of HsfA2 function as key regulators for the Hsf signaling network in response to environmental stress.
Plant Cell Physiol., 2011. 52(5): p. 933-45
[PMID:21471117] - Ikeda M,Mitsuda N,Ohme-Takagi M
Arabidopsis HsfB1 and HsfB2b act as repressors of the expression of heat-inducible Hsfs but positively regulate the acquired thermotolerance.
Plant Physiol., 2011. 157(3): p. 1243-54
[PMID:21908690] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Guan Q,Yue X,Zeng H,Zhu J
The protein phosphatase RCF2 and its interacting partner NAC019 are critical for heat stress-responsive gene regulation and thermotolerance in Arabidopsis.
Plant Cell, 2014. 26(1): p. 438-53
[PMID:24415771] - Nie S,Yue H,Xing D
A Potential Role for Mitochondrial Produced Reactive Oxygen Species in Salicylic Acid-Mediated Plant Acquired Thermotolerance.
Plant Physiol., 2016.
[PMID:26099269]
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