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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AT3G24860.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
Trihelix |
Protein Properties |
Length: 310aa MW: 35191.4 Da PI: 9.7586 |
Description |
Trihelix family protein |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 70.9 | 2.3e-22 | 65 | 145 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt++e+l+Lie ++e++ +++rg lk ++Wee++ + ++ g+er+++qC++k+e+++kr++ ++++++ s +p+++q+e
AT3G24860.1 65 WTQDETLLLIESYKEKWFAIGRGPLKSTHWEEIAVAAsSRSGVERTSTQCRHKIEKMRKRFRSERQSMGPI-----SIWPFYNQME 145
**********************************9887999****************************84.....68*******8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MATPSPTSSP PSDSNPNSAA TPPHQKQPPS PPQPTNPSSP PPHTTVVALA ASTSAVARKT 60 QPVLWTQDET LLLIESYKEK WFAIGRGPLK STHWEEIAVA ASSRSGVERT STQCRHKIEK 120 MRKRFRSERQ SMGPISIWPF YNQMEELDSS NPAPISARPL TRLPPNSNNR YVDDEEEDEE 180 EDNNNYEEEE EEDERQSKSR SINYILRRPG TVNRFAGVGG GLLSWGQKER SSKRKRNDGD 240 GGERRRKGMR AVAAEIRAFA ERVMVMEKKK IEFAKETVRL RKEMEIRRIN LIQSSQTQLL 300 QFINNAFDSF
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 232 | 246 | KRKRNDGDGGERRRK |
Function -- GeneRIF ? help
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- AST1 regulates stress-related genes by binding to the AGAG-box and/or GT motifs to mediate salt and osmotic stress tolerance. [AST1]
[PMID: 29420810]
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB028609 | 0.0 | AB028609.2 Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8. |
GenBank | AK118157 | 0.0 | AK118157.1 Arabidopsis thaliana At3g24860 mRNA for unknown protein, complete cds, clone: RAFL19-47-G19. |
GenBank | BT005491 | 0.0 | BT005491.1 Arabidopsis thaliana clone U50805 unknown protein (At3g24860) mRNA, complete cds. |
GenBank | CP002686 | 0.0 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |