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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AT3G14180.1 |
Common Name | ASIL2, MAG2.16 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
Trihelix |
Protein Properties |
Length: 443aa MW: 48314.1 Da PI: 10.2708 |
Description |
sequence-specific DNA binding transcription factors |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 47.9 | 3.6e-15 | 83 | 170 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ + +Li+a e+ +l+rg+lk+++W+ev++ + +++ ++ +qCk++++ ++k+yk++k + ++ + +s++++fd+l+
AT3G14180.1 83 CWSEAATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVssreDYGKIPKTDIQCKNRIDTVKKKYKQEKVRIANG--GGRSRWVFFDKLD 170
7*************************************8766667789999*******************99997..56668******98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0010431 | Biological Process | seed maturation |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MEDDEDIRSQ GSDSPDPSSS PPAGRITVTV ASAGPPSYSL TPPGNSSQKD PDALALALLP 60 IQASGGGNNS SGRPTGGGGR EDCWSEAATA VLIDAWGERY LELSRGNLKQ KHWKEVAEIV 120 SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP 180 TATSGVSGPV GGLHKIPMGI PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG 240 SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF 300 RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF 360 GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT QLEISQLKQQ HGRRMGNTSN 420 DHHHSRKNNI NAIVNNNNDL GNN
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Functional Description ? help
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Source |
Description |
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Phenotype -- Disruption Phenotype ? help
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Source |
Description |
UniProt | DISRUPTION PHENOTYPE: No visible phenotype under normal growth conditions. {ECO:0000269|PubMed:21330492}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP000600 | 0.0 | AP000600.1 Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MAG2. |
GenBank | AY072187 | 0.0 | AY072187.1 Arabidopsis thaliana unknown protein (At3g14180) mRNA, complete cds. |
GenBank | AY113853 | 0.0 | AY113853.1 Arabidopsis thaliana unknown protein (At3g14180) mRNA, complete cds. |
GenBank | CP002686 | 0.0 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 2000. 290(5499): p. 2105-10 [PMID:11118137] - Fujita H, et al.
An Arabidopsis MADS-box protein, AGL24, is specifically bound to and phosphorylated by meristematic receptor-like kinase (MRLK). Plant Cell Physiol., 2003. 44(7): p. 735-42 [PMID:12881501] - Yamada K, et al.
Empirical analysis of transcriptional activity in the Arabidopsis genome. Science, 2003. 302(5646): p. 842-6 [PMID:14593172] - Wang Y, et al.
Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. Plant Physiol., 2008. 148(3): p. 1201-11 [PMID:18775970] - Willmann MR,Mehalick AJ,Packer RL,Jenik PD
MicroRNAs regulate the timing of embryo maturation in Arabidopsis. Plant Physiol., 2011. 155(4): p. 1871-84 [PMID:21330492] - Nemoto K, et al.
Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. Phytochemistry, 2011. 72(10): p. 1136-44 [PMID:21477822] - Arabidopsis Interactome Mapping Consortium
Evidence for network evolution in an Arabidopsis interactome map. Science, 2011. 333(6042): p. 601-7 [PMID:21798944] - Barr MS,Willmann MR,Jenik PD
Is there a role for trihelix transcription factors in embryo maturation? Plant Signal Behav, 2012. 7(2): p. 205-9 [PMID:22353863]
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