|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
AT2G35640.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
Family |
Trihelix |
Protein Properties |
Length: 340aa MW: 38305.2 Da PI: 9.0497 |
Description |
Trihelix family protein |
Gene Model |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 56 | 1.1e-17 | 22 | 104 | 2 | 75 |
trihelix 2 WtkqevlaLiearremeerlrr.gk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75
Wt +e+l+Liea++ +++r r ++ ++ +W+++ +++++rg+ r+++qC++kw+nl ++ykki+e e++r + s
AT2G35640.1 22 WTVSETLVLIEAKKMDDQRRVRrSEkqpegrnkPAELRWKWIEEYCWRRGCYRNQNQCNDKWDNLMRDYKKIREYERSRVESS 104
*************966655544132444554449999****************************************994333 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MADADPSSGE QIVMRECRKG NWTVSETLVL IEAKKMDDQR RVRRSEKQPE GRNKPAELRW 60 KWIEEYCWRR GCYRNQNQCN DKWDNLMRDY KKIREYERSR VESSFNTVTS SSYWKMDKTE 120 RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM 180 AQPMHQIPTT IVLSLPPPPP QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP 240 GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT 300 EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC006068 | 0.0 | AC006068.4 Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence. |
GenBank | CP002685 | 0.0 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |