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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT1G79700.2 |
| Common Name | WRI4 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
AP2 |
| Protein Properties |
Length: 313aa MW: 35411 Da PI: 7.5952 |
| Description |
AP2 family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 52.3 | 1.4e-16 | 51 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d s+n k+ ++++lg ++ +e Aa+a++ a++k++g
AT1G79700.2 51 SPYRGVTRHRWTGRYEAHLWDkNSWNDtqtKKgRQVYLGAYDEEEAAARAYDLAALKYWG 110
68*******************888876788557*************************98 PP
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| 2 | AP2 | 52.5 | 1.2e-16 | 153 | 204 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
AT1G79700.2 153 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAIAYDIAAIEYRG 204
89****99**********99966...3.6*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
| GO:0009873 | Biological Process | ethylene-activated signaling pathway |
| GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process |
| GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
| GO:1904278 | Biological Process | positive regulation of wax biosynthetic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
| GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MAKVSGRSKK TIVDDEISDK TASASESASI ALTSKRKRKS PPRNAPLQRS SPYRGVTRHR 60
WTGRYEAHLW DKNSWNDTQT KKGRQVYLGA YDEEEAAARA YDLAALKYWG RDTLLNFPLP 120
SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL 180
YLGTYATQEE AAIAYDIAAI EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP 240
ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY 300
INPGFYNEFD YGP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Function -- GeneRIF ? help
Back to Top |
- These results support the hypothesis that the PRD gene is not a checkpoint for phosphate-starvation responses, but acts specifically as a regulator of root architectural responses to Pi starvation. [PRD]
[PMID: 18506479] - AP2-2 (At1g79700) is involved in mediating starvation-related and hormonal signals.
[PMID: 22754341]
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK117300 | 0.0 | AK117300.1 Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL16-86-I04. |
| Publications
? help Back to Top |
- Krizek BA,Prost V,Macias A
AINTEGUMENTA promotes petal identity and acts as a negative regulator of AGAMOUS.
Plant Cell, 2000. 12(8): p. 1357-66
[PMID:10948255] - Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Dal Bosco C, et al.
Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.
J. Biol. Chem., 2004. 279(2): p. 1060-9
[PMID:14576160] - Gong W, et al.
Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes.
Plant Physiol., 2004. 135(2): p. 773-82
[PMID:15208423] - Contento AL,Kim SJ,Bassham DC
Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation.
Plant Physiol., 2004. 135(4): p. 2330-47
[PMID:15310832] - Nole-Wilson S,Tranby TL,Krizek BA
AINTEGUMENTA-like (AIL) genes are expressed in young tissues and may specify meristematic or division-competent states.
Plant Mol. Biol., 2005. 57(5): p. 613-28
[PMID:15988559] - Sun K,Cui Y,Hauser BA
Environmental stress alters genes expression and induces ovule abortion: reactive oxygen species appear as ovules commit to abort.
Planta, 2005. 222(4): p. 632-42
[PMID:16133218] - Kim S,Soltis PS,Wall K,Soltis DE
Phylogeny and domain evolution in the APETALA2-like gene family.
Mol. Biol. Evol., 2006. 23(1): p. 107-20
[PMID:16151182] - Coupe SA, et al.
Systemic signalling of environmental cues in Arabidopsis leaves.
J. Exp. Bot., 2006. 57(2): p. 329-41
[PMID:16330523] - Osuna D, et al.
Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings.
Plant J., 2007. 49(3): p. 463-91
[PMID:17217462] - Fujita M, et al.
Identification of stress-tolerance-related transcription-factor genes via mini-scale Full-length cDNA Over-eXpressor (FOX) gene hunting system.
Biochem. Biophys. Res. Commun., 2007. 364(2): p. 250-7
[PMID:17937930] - Camacho-Cristóbal JJ, et al.
PRD, an Arabidopsis AINTEGUMENTA-like gene, is involved in root architectural changes in response to phosphate starvation.
Planta, 2008. 228(3): p. 511-22
[PMID:18506479] - Skinner DJ,Gasser CS
Expression-based discovery of candidate ovule development regulators through transcriptional profiling of ovule mutants.
BMC Plant Biol., 2009. 9: p. 29
[PMID:19291320] - Hanada K, et al.
Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.
Mol. Biol. Evol., 2011. 28(1): p. 377-82
[PMID:20736450] - Vogel MO,Gomez-Perez D,Probst N,Dietz KJ
Combinatorial signal integration by APETALA2/Ethylene Response Factor (ERF)-transcription factors and the involvement of AP2-2 in starvation response.
Int J Mol Sci, 2012. 13(5): p. 5933-51
[PMID:22754341] - To A, et al.
WRINKLED transcription factors orchestrate tissue-specific regulation of fatty acid biosynthesis in Arabidopsis.
Plant Cell, 2012. 24(12): p. 5007-23
[PMID:23243127] - Kilaru A, et al.
Oil biosynthesis in a basal angiosperm: transcriptome analysis of Persea Americana mesocarp.
BMC Plant Biol., 2015. 15: p. 203
[PMID:26276496] - Elliott RC, et al.
AINTEGUMENTA, an APETALA2-like gene of Arabidopsis with pleiotropic roles in ovule development and floral organ growth.
Plant Cell, 1996. 8(2): p. 155-68
[PMID:8742707]
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