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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT1G72570.1 |
| Common Name | AIL1, F28P22.24 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
AP2 |
| Protein Properties |
Length: 415aa MW: 47133 Da PI: 7.0773 |
| Description |
AP2 family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 51.1 | 3.3e-16 | 222 | 281 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++gr++A+++d ++ g +r ++++lg ++ +e+Aa+a++ a++k++g
AT1G72570.1 222 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRRgRQVYLGGYDEEEKAARAYDLAALKYWG 281
78*******************988886678557*************************98 PP
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| 2 | AP2 | 48.5 | 2.2e-15 | 324 | 375 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g
AT1G72570.1 324 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 375
78****************988532...5************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009873 | Biological Process | ethylene-activated signaling pathway |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE 60
YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD PNLSNDYGGF ERVGSVSVFK 120
SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES 180
NVSARVEEPV KVDEKRKRLV VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL 240
WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL 300
NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE 360
EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD SDQAKHSPTS SGAGH
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, seedlings, inflorescence, and siliques. Also detected at low levels in leaves. {ECO:0000269|PubMed:15988559}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ446422 | 0.0 | DQ446422.1 Arabidopsis thaliana clone pENTR221-At1g72570 ovule development protein (At1g72570) mRNA, complete cds. |
| Publications
? help Back to Top |
- Todd J,Post-Beittenmiller D,Jaworski JG
KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
Plant J., 1999. 17(2): p. 119-30
[PMID:10074711] - Krizek BA,Prost V,Macias A
AINTEGUMENTA promotes petal identity and acts as a negative regulator of AGAMOUS.
Plant Cell, 2000. 12(8): p. 1357-66
[PMID:10948255] - Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Jiao Y, et al.
A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development.
Plant Physiol., 2003. 133(4): p. 1480-93
[PMID:14605227] - Nole-Wilson S,Tranby TL,Krizek BA
AINTEGUMENTA-like (AIL) genes are expressed in young tissues and may specify meristematic or division-competent states.
Plant Mol. Biol., 2005. 57(5): p. 613-28
[PMID:15988559] - Kim S,Soltis PS,Wall K,Soltis DE
Phylogeny and domain evolution in the APETALA2-like gene family.
Mol. Biol. Evol., 2006. 23(1): p. 107-20
[PMID:16151182] - Nakano T,Suzuki K,Fujimura T,Shinshi H
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol., 2006. 140(2): p. 411-32
[PMID:16407444] - Underwood BA,Vanderhaeghen R,Whitford R,Town CD,Hilson P
Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.
Plant Biotechnol. J., 2006. 4(3): p. 317-24
[PMID:17147637] - Osuna D, et al.
Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings.
Plant J., 2007. 49(3): p. 463-91
[PMID:17217462] - Elliott RC, et al.
AINTEGUMENTA, an APETALA2-like gene of Arabidopsis with pleiotropic roles in ovule development and floral organ growth.
Plant Cell, 1996. 8(2): p. 155-68
[PMID:8742707]
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