PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT1G69810.1
Common NameATWRKY36, T17F3.16, WRKY36
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family WRKY
Protein Properties Length: 387aa    MW: 43350 Da    PI: 6.4402
Description WRKY DNA-binding protein 36
Gene Model
Gene Model ID Type Source Coding Sequence
AT1G69810.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.54.9e-27203262259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-S.SSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversa.edpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+ k ++ pr+YYrC+++ +Cpv+k+v+r+  e+++++ +tYeg+H+h+
  AT1G69810.1 203 NDGCQWRKYGQKTAKTNPLPRAYYRCSMSsNCPVRKQVQRCGeEETSAFMTTYEGNHDHP 262
                  8***************************99**********96157889***********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-28187264IPR003657WRKY domain
PROSITE profilePS5081124.202197264IPR003657WRKY domain
SuperFamilySSF1182908.5E-24198264IPR003657WRKY domain
SMARTSM007742.4E-32202263IPR003657WRKY domain
PfamPF031066.7E-25203262IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000293anatomyguard cell
PO:0009005anatomyroot
PO:0009047anatomystem
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MIKEETVSYF QTFDGVMAES DKEEELDATK AKVEKVREEN EKLKLLLSTI LNNYNSLQMQ  60
VSKVLGQQQG ASSMELDHID RQDENNDYDV DISLRLGRSE QKISKKEENK VDKISTKNVE  120
ESKDKRSALG FGFQIQSYEA SKLDDLCRQV KLANAENKCV SSRKDVKSVR NENHQDVLEE  180
HEQTGLKKTR VCVKASCEDP SINDGCQWRK YGQKTAKTNP LPRAYYRCSM SSNCPVRKQV  240
QRCGEEETSA FMTTYEGNHD HPLPMEASHM AAGTSAAASL LQSGSSSSSS STSASLSYFF  300
PFHHFSISTT NSHPTVTLDL TRPNYPNQLP DDYPLSSSSF SLNFSSPDPP PPSSHDHTLN  360
FSGLRTQAPL STDSLLARYR TRLSGQQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-182022641474WRKY transcription factor 1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible260403_at0.0
Expression AtlasAT1G69810-
AtGenExpressAT1G69810-
ATTED-IIAT1G69810-
Functional Description ? help Back to Top
Source Description
TAIRmember of WRKY Transcription Factor; Group II-b
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Function -- GeneRIF ? help Back to Top
  1. These results indicate that WRKY36 is a negative regulator of HY5 and that UVB represses WRKY36 via UVR8 to promote the transcription of HY5 and photomorphogenesis. The UVR8-WRKY36 interaction in the nucleus represents a novel mechanism of early UVR8 signal transduction in Arabidopsis.
    [PMID: 29379156]
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT1G69810.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Interaction ? help Back to Top
Source Intact With
BioGRIDAT1G69810
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT1G69810
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0292340.0BT029234.1 Arabidopsis thaliana At1g69810 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_564976.10.0WRKY DNA-binding protein 36
SwissprotQ9CAR40.0WRK36_ARATH; Probable WRKY transcription factor 36
TrEMBLQ058I40.0Q058I4_ARATH; At1g69810
STRINGAT1G69810.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM139131825
Representative plantOGRP1417875
Publications ? help Back to Top
  1. Eulgem T,Rushton PJ,Robatzek S,Somssich IE
    The WRKY superfamily of plant transcription factors.
    Trends Plant Sci., 2000. 5(5): p. 199-206
    [PMID:10785665]
  2. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  3. Czechowski T,Bari RP,Stitt M,Scheible WR,Udvardi MK
    Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes.
    Plant J., 2004. 38(2): p. 366-79
    [PMID:15078338]
  4. Arabidopsis Interactome Mapping Consortium
    Evidence for network evolution in an Arabidopsis interactome map.
    Science, 2011. 333(6042): p. 601-7
    [PMID:21798944]
  5. Yang Y, et al.
    UVR8 interacts with WRKY36 to regulate HY5 transcription and hypocotyl elongation in Arabidopsis.
    Nat Plants, 2018. 4(2): p. 98-107
    [PMID:29379156]