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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
AT1G19490.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
bZIP |
| Protein Properties |
Length: 471aa MW: 52632.6 Da PI: 5.6807 |
| Description |
bZIP family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 25.1 | 4e-08 | 156 | 218 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+e +r rr NRe+Ar +R++a +eeL +k++ L+ eN+ L+ e + ke ++l++ +
AT1G19490.1 156 EREERRIRRILANRESARQTIRRRQAMCEELSKKAADLTYENENLRREKDWALKEFQSLETIN 218
78899*******************************************999999999988766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MELEPISSSC CSSSSSSSGE ENTAAANMTE MEAAEALADL AQLAIMREQV FESAASWGSK 60
GKRVRKRVKT ESPPSDSLLK PPDSDTLPTP DLAEERLVKE EEEEEEVEPI TKELTKAPVK 120
SEINGETPKP ILASTLIRCS RSNGCGRSRQ NLSEAEREER RIRRILANRE SARQTIRRRQ 180
AMCEELSKKA ADLTYENENL RREKDWALKE FQSLETINKH LKEQVLKSVK PDTKEPEESP 240
KPSQVEMSTS STPFYFYNQN PYQLFCWPHV TQSSNPMISP LEFPTSGGAS AKTITTQEHE 300
NAADDNGQKT HFYVVPCPWF LPPPDHSNGV PFGLQDTQRG TFSNGHHIDD SSARPMDVTE 360
TPRSHLPTRI KEEDSGSPET RPLYDLNESA TEVLSEGGDG FPVTQQAYSL KHEDVSETTN 420
GVTLMPPGHH VLISLPEKKH GSLAAAEARK RRKELTRLKN LHGRQCRMQV G
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY099875 | 0.0 | AY099875.1 Arabidopsis thaliana unknown protein (At1g19490) mRNA, complete cds. |
| GenBank | BT000319 | 0.0 | BT000319.1 Arabidopsis thaliana unknown protein (At1g19490) mRNA, complete cds. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Jakoby M, et al.
bZIP transcription factors in Arabidopsis.
Trends Plant Sci., 2002. 7(3): p. 106-11
[PMID:11906833] - Dal Bosco C, et al.
Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.
J. Biol. Chem., 2004. 279(2): p. 1060-9
[PMID:14576160] - Deppmann CD, et al.
Dimerization specificity of all 67 B-ZIP motifs in Arabidopsis thaliana: a comparison to Homo sapiens B-ZIP motifs.
Nucleic Acids Res., 2004. 32(11): p. 3435-45
[PMID:15226410] - Deppmann CD,Alvania RS,Taparowsky EJ
Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks.
Mol. Biol. Evol., 2006. 23(8): p. 1480-92
[PMID:16731568] - Efroni I, et al.
Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses.
Dev. Cell, 2013. 24(4): p. 438-45
[PMID:23449474]
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