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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT1G19210.1 |
| Common Name | ERF017, T29M8.8 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
ERF |
| Protein Properties |
Length: 185aa MW: 20726.7 Da PI: 4.4993 |
| Description |
ERF family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.5 | 9.4e-20 | 10 | 61 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
s+ykGVr +k +g+Wv+eIr p++ r r++lg+++t+e+Aa+a +aa +l+g+
AT1G19210.1 10 SKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTPEKAARAFDAALYCLRGN 61
89*****999.**********933...5*************************995 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009873 | Biological Process | ethylene-activated signaling pathway |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MEGSSSSMQS KYKGVRKRKW GKWVSEIRLP NSRERIWLGS YDTPEKAARA FDAALYCLRG 60
NNAKFNFPDN PPVISGGRNL SRSEIREAAA RFANSAEDDS SGGAGYEIRQ ESASTSMDVD 120
SEFLSMLPTV GSGNFASEFG LFPGFDDFSD EYSGDRFREQ LSPTQDYYQL GEETYADGSM 180
FLWNF
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| Functional Description ? help
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| Source |
Description |
| TAIR | encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY008390 | 0.0 | AY008390.1 Arabidopsis thaliana ARF11/IAA22 gene, complete cds. |
| GenBank | BT006191 | 0.0 | BT006191.1 Arabidopsis thaliana clone C00087 (K) putative AP2 domain transcription factor (At1g19210) mRNA, complete cds. |
| GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
| GenBank | T29M8 | 0.0 | AC069143.3 Sequence of BAC T29M8 from Arabidopsis thaliana chromosome 1, complete sequence. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Yamada K, et al.
Empirical analysis of transcriptional activity in the Arabidopsis genome.
Science, 2003. 302(5646): p. 842-6
[PMID:14593172] - Taki N, et al.
12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis.
Plant Physiol., 2005. 139(3): p. 1268-83
[PMID:16258017] - Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Nakano T,Suzuki K,Fujimura T,Shinshi H
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol., 2006. 140(2): p. 411-32
[PMID:16407444] - Ma S,Gong Q,Bohnert HJ
Dissecting salt stress pathways.
J. Exp. Bot., 2006. 57(5): p. 1097-107
[PMID:16510518] - Lee J, et al.
Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development.
Plant Cell, 2007. 19(3): p. 731-49
[PMID:17337630] - Cartagena JA, et al.
The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen.
Dev. Biol., 2008. 315(2): p. 355-68
[PMID:18252252] - Lumba S, et al.
A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis.
Dev. Cell, 2014. 29(3): p. 360-72
[PMID:24823379] - Mar
Large-scale identification of gibberellin-related transcription factors defines group VII ETHYLENE RESPONSE FACTORS as functional DELLA partners.
Plant Physiol., 2014. 166(2): p. 1022-32
[PMID:25118255] - Li SJ, et al.
The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4.
Sci Rep, 2016. 6: p. 20151
[PMID:26837571] - Yin XR, et al.
Involvement of an ethylene response factor in chlorophyll degradation during citrus fruit degreening.
Plant J., 2016. 86(5): p. 403-12
[PMID:27037684]
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