 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
AT1G06280.1 |
| Common Name | ASL32, F9P14.14, LBD2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
| Family |
LBD |
| Protein Properties |
Length: 206aa MW: 23416.2 Da PI: 10.02 |
| Description |
LOB domain-containing protein 2 |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 110.3 | 1.4e-34 | 24 | 115 | 1 | 92 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92
aCa+Ck++r+kC+++C+l+pyfpa+++k+f++vhk+FG+snv+k++++++ee+r+++ +sl++eA +r++dPv G++g ++++ ++l+ k+
AT1G06280.1 24 ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKS 115
7***********************************************************************************99998775 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MMQRNSNNTS ITSNISNNSS SHQACASCKH QRKKCNNECI LSPYFPARKT KEFQAVHKVF 60
GVSNVQKMVR TVREEDRTKL SDSLTWEALW RQKDPVLGSY GEYRRICEEL KLYKSLVHNQ 120
PLIGWDNNQR VFNNNSNNKN GLAMTNSSGS GGFSVNNNGV GVNREIVNGG YASRNVQGGW 180
ENLKHDQRQQ CYAVINNGFK QHYLPL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB473865 | 0.0 | AB473865.1 Arabidopsis thaliana ASL32 mRNA for ASYMMETRIC LEAVES2-like 32 protein, complete cds. |
| GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
| GenBank | F9P14 | 0.0 | AC025290.3 Sequence of BAC F9P14 from Arabidopsis thaliana chromosome 1, complete sequence. |
| Publications
? help Back to Top |
- Iwakawa H, et al.
The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper.
Plant Cell Physiol., 2002. 43(5): p. 467-78
[PMID:12040093] - Shuai B,Reynaga-Peña CG,Springer PS
The lateral organ boundaries gene defines a novel, plant-specific gene family.
Plant Physiol., 2002. 129(2): p. 747-61
[PMID:12068116] - Dal Bosco C, et al.
Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.
J. Biol. Chem., 2004. 279(2): p. 1060-9
[PMID:14576160] - Wagner R,Pfannschmidt T
Eukaryotic transcription factors in plastids--Bioinformatic assessment and implications for the evolution of gene expression machineries in plants.
Gene, 2006. 381: p. 62-70
[PMID:16934950] - Matsumura Y,Iwakawa H,Machida Y,Machida C
Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and molecular comparisons between AS2 and other family members.
Plant J., 2009. 58(3): p. 525-37
[PMID:19154202] - Zhu J, et al.
AtMYB103 is a crucial regulator of several pathways affecting Arabidopsis anther development.
Sci China Life Sci, 2010. 53(9): p. 1112-22
[PMID:21104372]
|
