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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
AHYPO_021867-RA |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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| Family |
LBD |
| Protein Properties |
Length: 150aa MW: 16534.7 Da PI: 7.4798 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AHYPO_021867-RA | genome | BYU | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 100.1 | 2.2e-31 | 4 | 100 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C aCk+lrrkC+++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p ++r+da+ ++ yeA+ar++dPv + + + +q+q+ +++
AHYPO_021867-RA 4 PCGACKFLRRKCTSGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPMNRRHDAVLTISYEAQARLSDPVASIQAELAMVQNQVISSRMA 97
7***********************9989***********************************************************9888776 PP
DUF260 94 lal 96
+a
AHYPO_021867-RA 98 IAN 100
654 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:1900150 | Biological Process | regulation of defense response to fungus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 150 aa
Download sequence Send
to blast |
AIAPCGACKF LRRKCTSGCI FAPHFGSDQG AARFAAVHKV FGASNVSKLL LHIPMNRRHD 60
AVLTISYEAQ ARLSDPVASI QAELAMVQNQ VISSRMAIAN ALQNSQQQQQ ISNHGYDVVM 120
HHPQHHHPHH DDDDDDITPT HIAFANHLLH
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