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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AC235534.1_FGP007 |
Common Name | ZEAMMB73_342343 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
HD-ZIP |
Protein Properties |
Length: 863aa MW: 92985.3 Da PI: 6.7388 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
AC235534.1_FGP007 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 63.1 | 4.2e-20 | 137 | 192 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ ++t+ q+e+Le++F++ ++p++++r++L+++lgL+ rqVk+WFqNrR+ k
AC235534.1_FGP007 137 KKPYNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQLGLDPRQVKFWFQNRRTHLK 192
688999**********************************************9765 PP
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2 | START | 156.5 | 2.1e-49 | 363 | 604 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE........EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHH.HHHHHHCCCGG......... CS
START 2 laeeaaqelvkkalaeepgWvkss........esengdevlqkfeeskv.....dsgealrasgvvdmvla.llveellddke......... 70
la +a++elvk+a +ep+W e +n +e+l+ f++ + + +ea+r+sg+v+ ++ l+e ++d +
AC235534.1_FGP007 363 LAVSAMNELVKMARMNEPLWIPTIpspgspimETLNFKEYLKAFSPCVGvkptgFVSEASRESGIVTIDSSaALMEVFMDEVLlvppcslfl 454
7889*****************999999*****************9965599999************99887366666666666********* PP
....CT-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EE CS
START 71 ....qWdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRael 147
+W+ + ka+++e i +g gal lm+aelq+lsplvp R+++f+R+++ql +g w++vdvS+d q + + ++++
AC235534.1_FGP007 455 llprRWSDIFYcivaKASIVEEILPGvagsrnGALLLMQAELQMLSPLVPiREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCLATNTKCRR 546
********9999999****************************************************************998899******* PP
SSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
START 148 lpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
lpSg+++++++ng +kvtwveh+++ ++++h+l+++l++sgla ga +w+atlqrqce+
AC235534.1_FGP007 547 LPSGCVLQDTPNG-CKVTWVEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCEC 604
*************.*******************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 863 aa
Download sequence Send
to blast |
MANAACVGGS FLGVEKGKPA TVSNLGAPAV LLLVLACLPL VLPSSDPKQG MSFGDLDGGG 60 SAAGLQYPYG AFASSPVLSL TVVDARRRRG GGGNAKDASE AENEGQSMMS GHLDVVLSGG 120 GDGEDGEAAN QRKPKRKKPY NRHTPRQIEQ LEAMFKEFHH PDEKQRAQLS RQLGLDPRQV 180 KFWFQNRRTH LKCLTWLSLL HGPELGKNQL ERQENARLKH ENDKLRVENL SIREAIRDLV 240 CSCCGGPAVL GELSPEEHQL RLENARLRDE LARVCTVTSK FIGKPMSHME LLLAKEPHPM 300 TGSSLELAVA VGVGSSVPSS KMPVSTISEL AGSTSSSTGT VTTPMVTASL PMVSIDKSKF 360 AQLAVSAMNE LVKMARMNEP LWIPTIPSPG SPIMETLNFK EYLKAFSPCV GVKPTGFVSE 420 ASRESGIVTI DSSAALMEVF MDEVLLVPPC SLFLLLPRRW SDIFYCIVAK ASIVEEILPG 480 VAGSRNGALL LMQAELQMLS PLVPIREVTF LRFCKQLAEG AWAVVDVSID GLQTDQCLAT 540 NTKCRRLPSG CVLQDTPNGC KVTWVEHAEY PEASVHQLYQ PLMRSGLALG AGRWLATLQR 600 QCECLAILMS SLAAPEHDSA AVSLEGKWSL LKLARRMMEN FCAGMGASSS REWSMLDGFT 660 GSTGKDVRVM VQNSVDEPGV PPGVVLSVAT AVWLPVTPER LFNFLRDEEL RAEWDILSNG 720 GPMQQVLRIS KGQLDGNSVA LLRADHTDSH LNSILILQET CTDRSGAMVV YTPVDFPAMQ 780 LVLGGGDSKN VALLPSGFVI LPAGSTASGL GHKARGSLLT VAFQILVNSQ PTAKLTVESV 840 DTVYSLISCT IEKIKAALHC DVC
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 130 | 137 | QRKPKRKK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |