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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AC233899.1_FGP002 |
Common Name | LOC100273916, ZEAMMB73_328682 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
bHLH |
Protein Properties |
Length: 357aa MW: 37735.9 Da PI: 5.6166 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
AC233899.1_FGP002 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 44.4 | 3e-14 | 133 | 184 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++Y+++L+
AC233899.1_FGP002 133 QRMTHIAVERNRRRQMNEYLAVLRSLMPPS---YAHRGDQASIVGGAINYVRELE 184
79****************************...9******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MALEAVVFSQ PQAAAGHFGY GRGDSTTYAV PWCDLLQGGV GGGGGGFGDL CAAGEWDLDI 60 DTWAAAAAAA PTVELGGDDW DWEALSRDYQ SSDASTEYYH GGSRKAAAAP EPAGRRKRRR 120 AKAVKNKEEI ESQRMTHIAV ERNRRRQMNE YLAVLRSLMP PSYAHRGDQA SIVGGAINYV 180 RELEQLLQSL EVQKSIRSRP GAGAGAADSS PFAGFFSFPQ YSATTTSAHG GCSGNNNNNT 240 GSGGNRSDAA AAGAGAAGSS AVADVEVTMV EGHASLKVLA RRRPKQLLKL VAGLHQLRIP 300 PLHLNVTTVD AMVLYTFSLK VEDDSNMGSV EDIAAAVHEI IGSIEQQQQE EGETAVM
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 115 | 119 | RKRRR |
2 | 133 | 144 | RMTHIAVERNRR |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT042030 | 0.0 | BT042030.1 Zea mays full-length cDNA clone ZM_BFb0114I01 mRNA, complete cds. |