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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AC233850.1_FGP005 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
E2F/DP |
Protein Properties |
Length: 479aa MW: 52497.2 Da PI: 5.3392 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
AC233850.1_FGP005 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 83.2 | 2e-26 | 146 | 210 | 1 | 70 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70
r+++sL+llt+kf++ll+++++gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwk
AC233850.1_FGP005 146 RYDSSLGLLTKKFINLLKQAPDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWK 210
6899******************************...99..****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 479 aa
Download sequence Send
to blast |
MSGVGSGRPP AAQKILQSLR PPLSFATPSR SPFAAPDDYH RFPTPAAATA PAATSGGVGA 60 GAPPRDTIEE GLFIRTPLKR KATSEENDAA AEPSDCIITS PMPTSVSGKT VKASKAKAKN 120 SKTGPQTPTS NVGSPLNPPT PVGTCRYDSS LGLLTKKFIN LLKQAPDGIL DLNNAAETLE 180 VQKRRIYDIT NVLEGIGLIE KTLKNRIRWK ALDDSSVQLD NGISALQVLT KILSNQVLCI 240 PFSDMREKLR GLTEDENNKR WLYVTEDDIK GLPSFQNETL IAIKAPHGTT LEVPDPDEAG 300 DYLQRRYRIV LRSTMGPIDV YLVSQFDEKF EELGGVATPV KHSSVPRHQP AEDFNTYAGQ 360 SSTPMDVAHD VQHGQKIPQD PSALHDFGGM TRISPSDVHT DSDYWLLTEG DVSMTDMWKT 420 GRILDDHALR CLNFLTWKIE EVQWDQMDFL SEDVVTPRAH NQQPVTVDGP HMEVPSMDP
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in a cell cycle-dependent manner. Most abundant in early S phase. Decreased expression during the passage into G2. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543}. |
Uniprot | TISSUE SPECIFICITY: Highly expressed in the shoot apical meristem, emerging leaf primordia, and vascular tissues of young leaf primordia. Expressed in flowers, in epidermis and cortex of hypocotyls, and at lower levels in leaves. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11889041}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU971328 | 0.0 | EU971328.1 Zea mays clone 362179 transcription factor E2F3 mRNA, complete cds. |