PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC205562.3_FGP002
Common NameWRKY97, ZEAMMB73_085987
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 320aa    MW: 34317.4 Da    PI: 6.3636
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC205562.3_FGP002genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.69.4e-27116176259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                        dDg++WrKYGqK++ g+++pr+YYrCt++   +C ++k+v+r+++ p +++++Y+geH+++
  AC205562.3_FGP002 116 DDGHSWRKYGQKDILGARHPRAYYRCTHRnsqNCLATKQVQRADDHPALFDVVYHGEHTCR 176
                        8***************************98999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-26104176IPR003657WRKY domain
SuperFamilySSF1182902.35E-24113176IPR003657WRKY domain
SMARTSM007743.3E-39115177IPR003657WRKY domain
PfamPF031063.6E-26116176IPR003657WRKY domain
PROSITE profilePS5081120.461116173IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MAEAVESGGR ALLVSELGRV QDLVSQLELQ LRAPADADSV DLCRCLVQQI VALTDRSIGM  60
LHSSPDLAPS PLTATGSPIS SDAASDHHPF RPAGASPKKR KATARWTSQQ VRVSADDGHS  120
WRKYGQKDIL GARHPRAYYR CTHRNSQNCL ATKQVQRADD HPALFDVVYH GEHTCRPAAA  180
GGGSKRAQQH NPHAQAALQG LAARLTVATT TTDNAAGLPP MTPESCPVRG ASSPWSLASP  240
VGSDFNGCLH QGISPCPVPG YRDWTSDVDL QEVVSSAFAA VSSVAPLPVP DDEFMPLECV  300
EYVFDQNFDI DTAMPSLYYP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-22116176969OsWRKY45
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.100170.0meristem| ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC205562.3_FG002
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC205562.3_FGP002
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9550760.0EU955076.1 Zea mays clone 1508862 WRKY69 - superfamily of TFs having WRKY and zinc finger domains mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147379.10.0uncharacterized protein LOC100280987
TrEMBLB6SQR10.0B6SQR1_MAIZE; Putative WRKY DNA-binding domain superfamily protein
STRINGAC205562.3_FGP0020.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.19e-33WRKY family protein
Publications ? help Back to Top
  1. Alexandrov NN, et al.
    Insights into corn genes derived from large-scale cDNA sequencing.
    Plant Mol. Biol., 2009. 69(1-2): p. 179-94
    [PMID:18937034]