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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AC200038.4_FGP011 |
Common Name | LOC103632060 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
ERF |
Protein Properties |
Length: 339aa MW: 36429.9 Da PI: 7.1831 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
AC200038.4_FGP011 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 33.8 | 8.7e-11 | 161 | 210 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y GV + +rgr+vA+ rd + kr +lg f taeeA ++++ ++l+g
AC200038.4_FGP011 161 PRYGGVL-RQRRGRYVARTRDR-----KgKRMWLGMFNTAEEAVRRYDSETRRLRG 210
6799**6.4558******9993.....34*******************99888887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MEEHRLRCNA TAPTGRVACG GKRKAAAAGA PAEPRYRGAL RWHRGRYVAW THDQKGKRMW 60 LDTFDTAEEG GQESQPMVGS PVSTTLPPKL VEAAAETLST FSFSDEADAG GGAKAAAGPL 120 KFVMQIHMEE HRPRCNATAS TGRVAGGGKR KAAAAGAPAE PRYGGVLRQR RGRYVARTRD 180 RKGKRMWLGM FNTAEEAVRR YDSETRRLRG PSVITNFPAT SDDRVPLPAP SLHVVDEHSF 240 AADESQPVVG SPVSTTPPLK PVDAAAETLS TFSVVDALLP QLVEDAFSFA GVPFNDDLPT 300 LQLGGLDYLA TDPALELGSL PMWPGVDGCR FSDIGDDDF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727713 | 0.0 | KJ727713.1 Zea mays clone pUT5652 AP2-EREBP transcription factor (EREB123) gene, partial cds. |