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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA93G00267 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | bZIP | ||||||||
Protein Properties | Length: 685aa MW: 74902.4 Da PI: 6.1336 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.3 | 1.8e-14 | 207 | 268 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+ +k+ r+++NRe+A+ sR+RKk+++eeL+ kvk++ + ++L +++ e a+lk++ AA93G00267 207 EEYDKKKVRLIRNRESAQLSRLRKKQYVEELQGKVKSMHSTITELTGKISYFMAENAALKQQ 268 5679*******************************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-16 | 207 | 271 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-11 | 208 | 269 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.473 | 209 | 272 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.81E-12 | 211 | 269 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-15 | 211 | 270 | No hit | No description |
CDD | cd14704 | 8.33E-18 | 212 | 263 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006990 | Biological Process | positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0005635 | Cellular Component | nuclear envelope | ||||
GO:0005654 | Cellular Component | nucleoplasm | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016020 | Cellular Component | membrane | ||||
GO:0048471 | Cellular Component | perinuclear region of cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 685 aa Download sequence Send to blast |
MTESTSVIAL PPLMADENTN ISSESEILSI PPLDPLFLST SDPISMDFSE IDLFGDDDNF 60 DFSDLDLSFT NSDDFFNFHV DMEPTAIAEI PPDSVTDLRS SEDRGSEVTG NQINVEASGT 120 RNGEGGSSEE ASDSVNSQVS SHGSMTSVPA VCDTVDALSP DSKNLGFQKK PGSNSVSKRK 180 KEKGDVGDEY RSSKYSKADE KSAVTSEEYD KKKVRLIRNR ESAQLSRLRK KQYVEELQGK 240 VKSMHSTITE LTGKISYFMA ENAALKQQMA AASGAPMNPY MAGPPLPYQW MQYPYPVRAS 300 QIPVLPIPKL KTQPISSCRP KKPEIKKNPI KSKLKKVASI SFIGIVFLLF VLGVLVPFVK 360 HRGNSGSFDG LSNYEVQRYY DEHKEKIFTF GDHSNSSDVR RACGIGISEG NINSSGKIHG 420 EGDSCGVQGR PGNTSEPLFA SLYVPRNDGL VKIDGNLIIN SVLASERAMA SRKNVSETKK 480 EAELTVPSEL SSALAVPEIR GNGVMLPDLY KNREEQYSKA LSASSSEGKR LHQWFHGGSS 540 GALMDYNMCT EVFQFDIAPG AIVPSSVSNV SQEHLKNVTH DKKMNRRFLQ QLPVSLIKSE 600 LNTSGTQSSR DVQNSSLHGN NNKPKSSSMV VSVLLDPREV VDPDTDLVMA PKSLTRIFVV 660 VLLDSVKYVT YSCVLPLSGL NLVTT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in ER stress responses. Functions as a stress sensor and transducer in ER stress signaling pathway. After proteolysis by SBT6.1 (S1P) and S2P, the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones (PubMed:18156219, PubMed:18634751, PubMed:18849477, PubMed:20876872). Following ER stress, activates proteins involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:18156219, ECO:0000269|PubMed:18634751, ECO:0000269|PubMed:18849477, ECO:0000269|PubMed:20876872}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00345 | DAP | Transfer from AT3G10800 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA93G00267 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock. {ECO:0000269|PubMed:18849477}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006407504.1 | 0.0 | bZIP transcription factor 28 | ||||
Swissprot | Q9SG86 | 0.0 | BZP28_ARATH; bZIP transcription factor 28 | ||||
TrEMBL | A0A1J3CTC3 | 0.0 | A0A1J3CTC3_NOCCA; TGACG-sequence-specific DNA-binding protein TGA-1B | ||||
TrEMBL | A0A1J3K5A4 | 0.0 | A0A1J3K5A4_NOCCA; TGACG-sequence-specific DNA-binding protein TGA-1B (Fragment) | ||||
STRING | XP_006407504.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14397 | 18 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10800.1 | 0.0 | bZIP family protein |