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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AA79G00042 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family |
MIKC_MADS |
Protein Properties |
Length: 139aa MW: 16302.1 Da PI: 9.7914 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
AA79G00042 | genome | VEGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 83.8 | 1e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
k+i++k++rqv+f+kRrng+lKKA+ELS+LCda++a+i+fs++ kly +ss
AA79G00042 9 KKIKEKIKRQVSFAKRRNGLLKKAHELSILCDAQIALILFSENHKLYHFSS 59
689**********************************************96 PP
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2 | K-box | 20.8 | 1.6e-08 | 91 | 138 | 22 | 69 |
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69
+ Lk+eie+L+ ++ + G +L+ Ls+ ++ +Le qL++sl ++ ++K
AA79G00042 91 EALKREIETLKLNLELYGGHNLTILSFDQILRLELQLQSSLHNVQARK 138
579********************************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0030308 | Biological Process | negative regulation of cell growth |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0048530 | Biological Process | fruit morphogenesis |
GO:0080060 | Biological Process | integument development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 139 aa
Download sequence Send
to blast |
MRRGKIEIKK IKEKIKRQVS FAKRRNGLLK KAHELSILCD AQIALILFSE NHKLYHFSSD 60 STNIDDIILR YQMCMQQERG HECTNCVEIK EALKREIETL KLNLELYGGH NLTILSFDQI 120 LRLELQLQSS LHNVQARKV
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 1 | 17 | RRGKIEIKKIKEKIKRQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in the regulation of fruit growth. Contributes to integument development. Controls organ size via cell expansion (PubMed:20088901). Involved in the regulation of longitudinal growth of the fruit evenly throughout the radial axis (PubMed:20598091). Functions redundantly with TT16/AGL32 to repress nucellus growth and promote its degeneration (PubMed:27233529). {ECO:0000269|PubMed:20088901, ECO:0000269|PubMed:20598091, ECO:0000269|PubMed:27233529}. |