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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AA625G00003 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family |
HSF |
Protein Properties |
Length: 296aa MW: 34331.4 Da PI: 8.9439 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
AA625G00003 | genome | VEGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 113 | 2e-35 | 32 | 123 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl+k+y++++d+++++++sw ++ ++f+v+ + efa+++Lp++Fkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fk+g+k+ll++i+
AA625G00003 32 FLTKTYQLVDDPSTDHIVSWGDDHSTFIVWRPPEFARHLLPNFFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKRGEKHLLCEIH 119
9*****************************************************************99.........******************** PP
XXXX CS
HSF_DNA-bind 99 rkks 102
r+k+
AA625G00003 120 RRKT 123
**97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008356 | Biological Process | asymmetric cell division |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MAMMMEKSYS YSDGERASVT VEGQGKTVPA PFLTKTYQLV DDPSTDHIVS WGDDHSTFIV 60 WRPPEFARHL LPNFFKHNNF SSFVRQLNTY GFRKIVPDRW EFANEFFKRG EKHLLCEIHR 120 RKTSLLPQHS PFLTPLKEDF YWCDSSTTPS RTTNHYHSLD SRQQVIALTE DNERLRRTNT 180 LLISELTHMK KLYNDIIYFV QNHVKPVSPS SSIDYNNSNG HVLNSSPTSQ SSITLLEDDS 240 YNNHESNRNV RKTKLFGVSL PSSKKRSHRF SDQSSKTRLV LDNSELDLNL MTASTF
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |