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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA5G00193 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | bZIP | ||||||||
Protein Properties | Length: 185aa MW: 21793.4 Da PI: 7.4357 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.5 | 1.2e-12 | 73 | 107 | 4 | 38 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 kr rr+ +NRe+ArrsR RKk++ieeL++ v++L AA5G00193 73 EKRIRRMVSNRESARRSRMRKKMQIEELQQQVEQL 107 59*******************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-12 | 70 | 134 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.909 | 72 | 135 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.0E-10 | 74 | 132 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.1E-12 | 74 | 130 | No hit | No description |
SuperFamily | SSF57959 | 3.69E-11 | 74 | 129 | No hit | No description |
CDD | cd14702 | 1.25E-15 | 75 | 126 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 77 | 92 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MESNNVHRSH CFDLFEGNNL SQTEHFTSIF LPNPDFNLSP NISTLSNNNH SHNSNPNGPN 60 NNIYHHEFNL TDEKRIRRMV SNRESARRSR MRKKMQIEEL QQQVEQLMMM HQYLSQKVIS 120 LLENNHQILQ ENLQLKEKVS SFHIIMADML SPIKNIENIN DRNVNHIQEE SSNRTNTPFF 180 NVLGK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA5G00193 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_200891.1 | 7e-67 | basic leucine-zipper 70 | ||||
Refseq | XP_020877227.1 | 7e-67 | LOW QUALITY PROTEIN: basic leucine zipper 43 | ||||
Refseq | XP_020889024.1 | 4e-67 | basic leucine zipper 43 | ||||
TrEMBL | D7MUE4 | 4e-66 | D7MUE4_ARALL; BZIP transcription factor family protein | ||||
STRING | fgenesh2_kg.8__2046__AT5G60830.1 | 7e-67 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6185 | 25 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 2e-53 | basic leucine-zipper 70 |