PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA503G00001
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family SAP
Protein Properties Length: 449aa    MW: 50288.7 Da    PI: 6.9377
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA503G00001genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP716.33.1e-21814481454
          SAP   1 mssssssssseseegseggeggdassgesegpsssrqr.aanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrlt 97 
                  msssss sss+++++ +       +s  +e+ps+sr+r aan+vwpePfle+la+qvaidas s+Grl+ a+alanvf+vcstw+a+srsd+lwq l 
  AA503G00001   1 MSSSSS-SSSDNGASRH-------GSRLFEAPSQSRPRrAANDVWPEPFLESLAIQVAIDASLSTGRLSVAPALANVFRVCSTWQAISRSDHLWQLLL 90 
                  555555.3444554432.......2346889999998779********************************************************** PP

          SAP  98 rriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlG 195
                   ++W+rt+l++dtWree+i+rhrt+rnf+tr+y+y+tl+fd +d de   +d+lsCrcl+lsd ylaaGfadG++rlf l++rlhv+t++p  rdr+G
  AA503G00001  91 GHVWSRTRLMHDTWREEFIFRHRTTRNFQTRTYTYFTLHFDLSDADE---PDSLSCRCLTLSDLYLAAGFADGTIRLFLLNNRLHVRTLRPPLRDRFG 185
                  ******************************************97776...799********************************************* PP

          SAP 196 rfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavm 293
                  rfsravsGi+isdsrlvfat+dGdihva +dg  ++++r++++Gd+vndGalvdf+G+grWwvGl+aGvpGrafhiWd+++ e++fvGGsltdPeavm
  AA503G00001 186 RFSRAVSGIIISDSRLVFATMDGDIHVADLDG--VGHTRTVYAGDIVNDGALVDFTGCGRWWVGLFAGVPGRAFHIWDCNSYETIFVGGSLTDPEAVM 281
                  *******************************9..66************************************************************** PP

          SAP 294 GWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer.rGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgv 389
                  GWh+ltelt+++Gr+r+++ + avaCt++r++v+dlrnqgv+l+e+ee  rGl+v+++d+++ ayv+vd rG+a+vrrve+ e++c+frv+g +qr+v
  AA503G00001 282 GWHTLTELTTSLGRLRISGSNRAVACTRWRVMVIDLRNQGVILGEDEELrRGLMVTAFDSNDAAYVRVDGRGNANVRRVESQETLCEFRVSGvSQRRV 379
                  *******************************************9988766************************************************ PP

          SAP 390 lgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss.....dgtihlldfga 454
                  +gCvn+ +a ++ ggv+rvWeie+ e ylys+rer+ge++a+vaddr+vav+ss     ++ ihl+dfga
  AA503G00001 380 MGCVNRQFAFMCVGGVTRVWEIERGE-YLYSFRERIGEIDAMVADDRYVAVASSsestaQSGIHLWDFGA 448
                  ************************77.************************99877777889*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.501.4E-564128No hitNo description
SuperFamilySSF813834.58E-665116IPR001810F-box domain
SuperFamilySSF509781.71E-13139318IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.2E-10141228IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.102.2E-10351446IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509781.71E-13384445IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MSSSSSSSSD NGASRHGSRL FEAPSQSRPR RAANDVWPEP FLESLAIQVA IDASLSTGRL  60
SVAPALANVF RVCSTWQAIS RSDHLWQLLL GHVWSRTRLM HDTWREEFIF RHRTTRNFQT  120
RTYTYFTLHF DLSDADEPDS LSCRCLTLSD LYLAAGFADG TIRLFLLNNR LHVRTLRPPL  180
RDRFGRFSRA VSGIIISDSR LVFATMDGDI HVADLDGVGH TRTVYAGDIV NDGALVDFTG  240
CGRWWVGLFA GVPGRAFHIW DCNSYETIFV GGSLTDPEAV MGWHTLTELT TSLGRLRISG  300
SNRAVACTRW RVMVIDLRNQ GVILGEDEEL RRGLMVTAFD SNDAAYVRVD GRGNANVRRV  360
ESQETLCEFR VSGVSQRRVM GCVNRQFAFM CVGGVTRVWE IERGEYLYSF RERIGEIDAM  420
VADDRYVAVA SSSESTAQSG IHLWDFGAL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA503G00001
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024007533.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A178UR360.0A0A178UR36_ARATH; SAP
STRINGAT5G35770.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]