PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA46G00174 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | bZIP | ||||||||
Protein Properties | Length: 151aa MW: 17873.4 Da PI: 10.9153 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.3 | 5.2e-11 | 60 | 113 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 k+ +r+++NRe+A+rsR RK+++ie L+e+v + eN++ ++l l +++ AA46G00174 60 EKKRKRMESNRESAKRSRMRKQKQIEDLREEVNRIGLENREISNRLRILLYQIE 113 5999***********************************988877766655555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-12 | 57 | 121 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-9 | 58 | 115 | No hit | No description |
PROSITE profile | PS50217 | 10.852 | 59 | 122 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-9 | 61 | 111 | No hit | No description |
Pfam | PF00170 | 4.7E-9 | 61 | 113 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.71E-11 | 62 | 109 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 64 | 79 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MKSGSDESCA RSHNSGYFAG VSSPQSIELD SEFTKLVKTG SNSFNNRKGL NRPVMKITDE 60 KKRKRMESNR ESAKRSRMRK QKQIEDLREE VNRIGLENRE ISNRLRILLY QIEQVSRVNH 120 QLLSEQEILR RKLSEMRQIL ILRELQIQQQ W |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 78 | KRSRMR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA46G00174 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006404751.1 | 3e-53 | regulatory protein opaque-2 | ||||
TrEMBL | A0A1J3G131 | 1e-54 | A0A1J3G131_NOCCA; Basic leucine zipper 43 (Fragment) | ||||
TrEMBL | A0A1J3G9Q7 | 1e-54 | A0A1J3G9Q7_NOCCA; Basic leucine zipper 43 (Fragment) | ||||
STRING | XP_006404751.1 | 1e-52 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7855 | 18 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 4e-48 | basic leucine-zipper 6 |