PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA30G00282 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | bZIP | ||||||||
Protein Properties | Length: 224aa MW: 26117.1 Da PI: 8.2279 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.4 | 1.4e-12 | 126 | 181 | 4 | 59 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k+ +r+++NRe+ArrsR RK+ ie+L++ v L+ eN++L ++l +++++ AA30G00282 126 EKKRKRMESNRESARRSRMRKQTHIENLQNQVNRLDLENRELLNRLRLVLYQIQRV 181 5999*************************************999887766666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.3E-16 | 123 | 187 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.2E-11 | 124 | 173 | No hit | No description |
PROSITE profile | PS50217 | 11.277 | 125 | 188 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.7E-10 | 127 | 174 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.7E-11 | 127 | 176 | No hit | No description |
CDD | cd14702 | 5.24E-17 | 128 | 175 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 130 | 145 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MLSTVPAFTE PGLVNQFPGY QTGFTPLEWD WDFTNFFSLN QSSLEPVLPS PCFVESDTGS 60 VRINSGLQTG SDESCTGSIK IKQGFNVTNS SKSEEPDSND TNSGSVKQNH NRNYELNQQV 120 FPVNDEKKRK RMESNRESAR RSRMRKQTHI ENLQNQVNRL DLENRELLNR LRLVLYQIQR 180 VNTDNNRLVT EQEILRRRLS EMRQILILQQ WEQNRSLITN HQMI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 146 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA30G00282 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010446630.2 | 1e-92 | PREDICTED: light-inducible protein CPRF3 | ||||
TrEMBL | V4MAA1 | 1e-85 | V4MAA1_EUTSA; Uncharacterized protein | ||||
STRING | XP_010446630.1 | 6e-91 | (Camelina sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7855 | 18 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37730.1 | 4e-71 | basic leucine-zipper 7 |