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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA12G00046 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | bZIP | ||||||||
Protein Properties | Length: 245aa MW: 26815.6 Da PI: 5.9053 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.9 | 8.2e-17 | 89 | 141 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +lkr rr+ +NRe+A+rsR++K++ +++Le v++L++eN++L k+l ++e AA12G00046 89 DLKRIRRMFSNRESAKRSRKKKQEHLAKLESQVDSLKGENSTLYKQLIDATQE 141 79*****************************************9988666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.8E-14 | 82 | 143 | No hit | No description |
SMART | SM00338 | 2.2E-15 | 87 | 151 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.9E-14 | 89 | 136 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.978 | 89 | 141 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.94E-12 | 90 | 141 | No hit | No description |
CDD | cd14702 | 3.81E-19 | 92 | 143 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 94 | 109 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MQDYSCELKD SLLWTESLIS SGPFLDSIID AQSSICENLS ADSPVSANKP EARRGVRRTT 60 SGSSSHEHSD EEDAETEAGQ SEMTNDPNDL KRIRRMFSNR ESAKRSRKKK QEHLAKLESQ 120 VDSLKGENST LYKQLIDATQ EFRSAGTNNR VLKSDVETLR VKVKLAEDLV ARGSLTSSLN 180 QLLQTHLSPP QHINNLHYAG TTSPTITGHS DQSLFPGITL SGQNSSPGLG TVSSEAVSCV 240 SDIWP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA12G00046 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_568457.1 | 1e-145 | basic leucine zipper 9 | ||||
Swissprot | Q9FUD3 | 1e-146 | BZIP9_ARATH; Basic leucine zipper 9 | ||||
TrEMBL | A0A178UG19 | 1e-144 | A0A178UG19_ARATH; BZO2H2 | ||||
STRING | AT5G24800.1 | 1e-145 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6370 | 26 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 1e-116 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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