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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA118G00053 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | bZIP | ||||||||
Protein Properties | Length: 461aa MW: 50779.4 Da PI: 8.784 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.9 | 5.2e-14 | 383 | 432 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ e+ + AA118G00053 383 RRQKRMIKNRESAARSRARKQAYTLELEAEVAQLKELNEELQKKQVEIME 432 69*************************************99987655544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-13 | 379 | 444 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.53 | 381 | 426 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-12 | 383 | 434 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.5E-10 | 383 | 434 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-13 | 383 | 438 | No hit | No description |
CDD | cd14707 | 2.48E-25 | 383 | 435 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 386 | 401 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence Send to blast |
MGSRLNFKNF VSDEVINQKQ PPTVGNLPLA RQNSVFSLTF DEFQNTCGGI GKDFGSMNMD 60 ELLKNIWTAE ENQSMMNNNI NSFNNTSNVT NGSIGNTVIN SCNNGGLSVG VGGGEGCGLY 120 SGGNLQRQGS LTLPRPLSQK TVDDVWRELM KEDDIGTVGG VGGAYGGSSV PPRQQTLGEM 180 TLEEFLVRAG VVREESQPVD ARLNNSNGVF YGFGSNAGLE LPQNGFGVNQ LQDFTGTGVA 240 VRPNQLITQT QPTQMQQPQK VQQPQELIKQ PQQLMQKQDT TFPKQTTIAF SNTVDVENHA 300 PLAIQCQEVK PSIHGVRDHS MNNSLLQAVD FKTGVTVAAV SPGSQMSPDL TPKSAMDASL 360 SPVPYMFGRG RKTGAVLEKV IERRQKRMIK NRESAARSRA RKQAYTLELE AEVAQLKELN 420 EELQKKQVEI MEKQKRQLME PMRRPWGCKR QCLRRTLTGP W |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00038 | PBM | Transfer from AT4G34000 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA118G00053 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006412286.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Refseq | XP_024005691.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Refseq | XP_024005692.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Swissprot | Q9M7Q3 | 0.0 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | E4MY11 | 0.0 | E4MY11_EUTHA; mRNA, clone: RTFL01-30-J01 | ||||
TrEMBL | V4MBG2 | 0.0 | V4MBG2_EUTSA; Uncharacterized protein | ||||
STRING | XP_006412286.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM734 | 27 | 129 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 0.0 | abscisic acid responsive elements-binding factor 3 |