PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA10G00404
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family WRKY
Protein Properties Length: 2524aa    MW: 282859 Da    PI: 7.751
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA10G00404genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-30205261259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgynWrKYGqK++kg e+prsYY+Ct a+Cpvkkkvers+ d+++++i+Y+g+H he
  AA10G00404 205 DDGYNWRKYGQKPIKGCEYPRSYYKCTNATCPVKKKVERSS-DGQITQIIYKGQHSHE 261
                 8****************************************.***************8 PP
2WRKY81.21.1e-25362408147
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv 47 
                 ldDgy+WrKYGqK vkg+++prsYY+Ct+a+C+v+k+ver+++d k+
  AA10G00404 362 LDDGYRWRKYGQKIVKGNPHPRSYYKCTTANCTVRKHVERASTDAKA 408
                 59*****************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-27197263IPR003657WRKY domain
SuperFamilySSF1182908.5E-24202263IPR003657WRKY domain
SMARTSM007742.6E-34204262IPR003657WRKY domain
PfamPF031061.5E-23205260IPR003657WRKY domain
PROSITE profilePS5081124.191205263IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.4E-27347409IPR003657WRKY domain
SuperFamilySSF1182901.44E-21354407IPR003657WRKY domain
PROSITE profilePS5081128.357357411IPR003657WRKY domain
SMARTSM007744.8E-24362432IPR003657WRKY domain
PfamPF031062.4E-19363406IPR003657WRKY domain
Gene3DG3DSA:3.30.200.204.5E-29513617No hitNo description
SuperFamilySSF561123.91E-87513811IPR011009Protein kinase-like domain
PROSITE profilePS5001143.905519804IPR000719Protein kinase domain
PfamPF000691.1E-66519804IPR000719Protein kinase domain
SMARTSM002204.5E-90519804IPR000719Protein kinase domain
CDDcd078404.99E-129519804No hitNo description
PROSITE patternPS001070525548IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.102.4E-54618876No hitNo description
PROSITE patternPS001080639651IPR008271Serine/threonine-protein kinase, active site
PfamPF139471.5E-2110601171IPR025287Wall-associated receptor kinase, galacturonan-binding domain
PfamPF084885.3E-2012021313IPR013695Wall-associated receptor kinase
Gene3DG3DSA:2.10.25.104.8E-713041370No hitNo description
PROSITE patternPS01187013441369IPR018097EGF-like calcium-binding, conserved site
Gene3DG3DSA:2.60.120.2001.2E-913731459IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF561124.18E-7614351723IPR011009Protein kinase-like domain
PROSITE profilePS5001136.79614521728IPR000719Protein kinase domain
SMARTSM002203.5E-3414521728IPR000719Protein kinase domain
PfamPF000691.0E-4714531719IPR000719Protein kinase domain
CDDcd140666.32E-8114581726No hitNo description
Gene3DG3DSA:3.30.200.204.1E-2414601516No hitNo description
Gene3DG3DSA:1.10.510.102.9E-4215171719No hitNo description
PROSITE patternPS00108015741586IPR008271Serine/threonine-protein kinase, active site
PfamPF139475.7E-2517891897IPR025287Wall-associated receptor kinase, galacturonan-binding domain
PfamPF084884.9E-2619402039IPR013695Wall-associated receptor kinase
Gene3DG3DSA:3.30.200.202.2E-2621532250No hitNo description
SuperFamilySSF561127.42E-7721692460IPR011009Protein kinase-like domain
PROSITE profilePS5001137.77121892476IPR000719Protein kinase domain
SMARTSM002201.7E-3221892463IPR000719Protein kinase domain
PfamPF000695.2E-4821912456IPR000719Protein kinase domain
CDDcd140662.02E-8121952463No hitNo description
Gene3DG3DSA:1.10.510.105.3E-4522512458No hitNo description
PROSITE patternPS00108023112323IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding
GO:0030247Molecular Functionpolysaccharide binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 2524 aa     Download sequence    Send to blast
MAEGDASSMK TTTLVAPTRP TITIPQNPST ETASYFFGSG DGLSLSPGPL SFVSSLFADN  60
FPEGLTPDNQ RSNTTSFSQL LAGAMSVSPG GRSGSQMFTI PSGFSPSSLL NSPIFFPPQQ  120
QQPAVFQPPQ SQPQSQPQPQ RQDTFPQGPQ HMFLPTTSTA TNTLHNRPSF EVSKSDQRAK  180
NHTNTNTNNN THRSYNVVNV DKPADDGYNW RKYGQKPIKG CEYPRSYYKC TNATCPVKKK  240
VERSSDGQIT QIIYKGQHSH ERPQNRRGGG VRDSSEVNDV LYIGAGCSSG HMIDQSSDDS  300
GYGISRDHDD NDDDNDDDDD DDGDAPASKI RKIGGNSSAS MTHRTVTEPK IIVQTRSEVD  360
LLDDGYRWRK YGQKIVKGNP HPRSYYKCTT ANCTVRKHVE RASTDAKALA SPAGPRPQRR  420
RSDTSVHYGH PRPHHNRHVL PVPPPHGRVV NSSPLRHRHG GKDFDDDAPR SRTTGVSLRS  480
GLPYNNVEAE QVAAGWPTWL SSAAPEAVHG WLPLRAEGFE KREKIGQGTY SNVFRACEVG  540
TGRVMALKKI RVQNFETENI RFIAREIMIL RRLDHPNIMK LEGIIASRNS NSMYFVFDYM  600
EHDLEGLCSS PDIQFTEAQI KCYMKQLLWA VEHCHMRGIM HRDIKAANIL VNNKGILKLA  660
DFGLANIVTP KNKNHLTSRV VTLWYRAPEL LMGSTSYNVA VDLWSIGCVF GEILTGRPIL  720
KGRTEIEQLH KIYKLSGSPD EHFWDRNKLH PQTKMFRPQH QYEGCLRERF EEFPETAVNL  780
LEILLSIDPE KRGTASSAIM SEYFNTQPYA CDPSTLPKYP PNKEMDAKYR EELQRRRRVN  840
IKKRDNLASK KLHKSRRTVK EPDNPTKLQT QQEMKKETQT QIMLQTPSET FQATTTRSEF  900
PYTGLSQTTA PASGFAWAGP AKKRKENDVA STLTTYNQVG SESHVSGTSM AFAKNTFGLT  960
LNEEKPGFLR PQVSLDSSAF FSGALHKKLG QDLELKNIGA NAKIFQSNGM NEILRRTESD  1020
DRIGSQRRRR KDMSLSLLIL MLSNILFLII FAASAYNSNS SCQRKCGKME IPYPFGIGEG  1080
CYLEKWYEIQ CLENDTALLI ALDKEVVNIT LPGGVIADEF DREEEYGVFH MKNPITSKDC  1140
TNNQKEEVNL NLTGSPFTLS RDNTLVAFGC DYKAFYTNMK YYMVGCASNC TAAHSLPPSE  1200
NGVCEGTGCC YVDLPYSFEN VFGVKIEANS LTTTTTTVTR RECKVAFLTD VPTDYVRMSL  1260
SQPNYSNQLH AKGYSWIEII WFIDTTNLSF ITSLNCIDKT NSISTNHSNA TCVYDYYQSP  1320
SGYATCTCSS GFTGNPYIPG DCKDYNECLN KTMCPETETC VNLPGHYRCV PKKTILPIVI  1380
GLSSGFGVLV LIGGTYCLFK FIKRRRKMNR KRFFFKRNGG LLLQQQLRAT DKNVDKTRIF  1440
TSKELEKATE NFSLNRKLGQ GGQGTVYKGM LVDGGIVAVK KSIAIDKDKL EEFINEIVIL  1500
SQINHRNIVR LLGCCLETEV PILVYEFIPH GNLSEHLHDD LEDSTITTWK MRLRIVVDIA  1560
GALSYLHSAA SFPIYHRDVK SSNIMLDGKY RAKVSDFGTS RTVSLDHSHL TTVVSGTMGY  1620
VDPEYFQSSQ FTDKSDVYSF GVLLAELITG EKAISLLRSQ EKRALTTYFI AAMKENRLEE  1680
IIDARIKDDC DMEQVMAAAK LARSCLNRKG KNRPSMREVS VELEKIYLSE TDTEYPQFVV  1740
ESDEEEQVHI EVDSLNDMGV VDAPSASSLE IANTSFLDAQ PQFPRQTCSC QTKCGKIEIP  1800
YPFGMGEGCY MEKWYEIKCV NNNTPFLSAL GKEVVNISLP HPHYNRMPYG SVRIKNAITS  1860
KGCSNHKEGD SGESVLNLTG TPFFVSSKNE LVAVGCNNKA SLTNVESSMV GCTSTCTTPT  1920
TTVVIHPYYY DEERYKNEGI CNGTRCCHAF LPDSCQQIVG VSIDDNTSTT TTTTVTERGC  1980
KVAFLTDEPF SLKYRSNYSK QIHAKGYSLV EIAWFIHTTN LSFLTSLGCP NANEYDQLSS  2040
RAIRRVTCIY FNFSSEYLSY SCPLGFTGNP FIPGGCKAEL NGCQGAKRSC LNTEICVSLQ  2100
QLRYHQCVPA MTMIKIIALS LGLGLLIIIS GIYWLVKFIK WRKKIYRKRK YFKRNGGLLL  2160
QQQLHSTESN VDKTRIFTSK ELEKATGNFS LNRMLGQGGQ GTVYKDMLVD GGIVAVKKSI  2220
AIDEDKLEEF INEVVILSQI NHRNIVKLLG CCLETEVPIL VYEFIPNGNL FEHLHDDLED  2280
STITTWKVRL RIAVDIAGAL SYLHSAASFP IYHRDIKSTN IMLDAKYRAK VSDFGTSRSV  2340
TLDHTHLTTV VSGTAGYLDP EYFQSSQFTD KSDVYSFGVV LVELITGAKP FSFLRSQENR  2400
ALAAYFIVSM KENRLDEIID ARIKDDCNME QVMATAKLAR SCLNRKGKKR PSMREVSTEL  2460
ERIRSSETDL EAQVFIVESD EEEHVHIEVE SWNDVDVAAA STSSSEVATT SFVDAQPLFP  2520
RQTW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5efq_A8e-7352516497347Cyclin-dependent kinase 13
5efq_C8e-7352516497347Cyclin-dependent kinase 13
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
110261031RRRRKD
Functional Description ? help Back to Top
Source Description
UniProtSerine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA10G00404
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ8VYA30.0WAKLJ_ARATH; Wall-associated receptor kinase-like 10
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM13105810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01080.11e-113WRKY DNA-binding protein 58
Publications ? help Back to Top
  1. Verica JA,He ZH
    The cell wall-associated kinase (WAK) and WAK-like kinase gene family.
    Plant Physiol., 2002. 129(2): p. 455-9
    [PMID:12068092]
  2. Diener AC,Ausubel FM
    RESISTANCE TO FUSARIUM OXYSPORUM 1, a dominant Arabidopsis disease-resistance gene, is not race specific.
    Genetics, 2005. 171(1): p. 305-21
    [PMID:15965251]
  3. Mayerhofer R, et al.
    Complexities of chromosome landing in a highly duplicated genome: toward map-based cloning of a gene controlling blackleg resistance in Brassica napus.
    Genetics, 2005. 171(4): p. 1977-88
    [PMID:16143600]
  4. Meier S, et al.
    The Arabidopsis wall associated kinase-like 10 gene encodes a functional guanylyl cyclase and is co-expressed with pathogen defense related genes.
    PLoS ONE, 2010. 5(1): p. e8904
    [PMID:20126659]