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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
96442 |
Common Name | SELMODRAFT_449657 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
GRAS |
Protein Properties |
Length: 439aa MW: 49211.7 Da PI: 6.0507 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
96442 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 342.8 | 5.7e-105 | 70 | 431 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
lv+lLl +Aea g++ la a++ rl+ ++++g++mqR+aayf AL+ rl++ k ++ +e+ + +++ a+++++e++P++kf+h+ aNqaIl
96442 70 LVHLLLGAAEATVCGETDLAIAIIDRLKSCcSTQSGTTMQRIAAYFRDALNCRLHG-----LKFFSRTES----QFDTVGAFHVLHEICPYIKFGHFSANQAIL 164
689***************************556667********************.....444443333....68889999********************** PP
GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvak.rledleleeLrvkpgEalaVn 205
e+v+ge+rvHi Dfdi+ G+QWp+L+q+La R++gpp+l+iT++ +p+s+ +++etg+rLa A++++vpf fn + ++ + e++ ++L++ +gEal+Vn
96442 165 ESVAGEQRVHIFDFDITDGVQWPSLMQSLALRAGGPPQLKITALYRPNSKgALSTTQETGKRLAACARQFNVPFVFNQVRVDgESEEFLSSSLKLIQGEALVVN 268
***********************************************99989999***********************97777999****************** PP
GRAS 206 lvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerh 309
++l+l ++ +s + + + +L + l+P+v+ +ve++++++s++F rf eal++ys+lfdslea+l++e+e r+ vEr++lg++i+n v+ + ++ +
96442 269 CMLHLPHMSCHSRD---AVRFFLGKMAALRPRVLAIVEEDLSCTSTTFTGRFHEALYHYSTLFDSLEATLASEDEMRSLVERVFLGPRIKNTVTSAVSR-SPLE 368
****9999844444...4559*************************************************************************99986.6666 PP
GRAS 310 etlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+++++W+ e++GF++ ++s+++ +qa+ll+ ++ dg++++e++++++l+Wk+rpL+++S+W
96442 369 KEANRWSGLAEAVGFQQRSFSSYNRCQARLLVGLFQ-DGHQIQEDEDTMLLCWKSRPLIAASVW 431
779*********************************.*************************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 439 aa
Download sequence Send
to blast |
MLDDHERSFP DPQQVAVNPV SPPQYQQQQE IERSLVDFRH HSHDERVDFV YPELGVQVHP 60 WDEDMDSIRL VHLLLGAAEA TVCGETDLAI AIIDRLKSCC STQSGTTMQR IAAYFRDALN 120 CRLHGLKFFS RTESQFDTVG AFHVLHEICP YIKFGHFSAN QAILESVAGE QRVHIFDFDI 180 TDGVQWPSLM QSLALRAGGP PQLKITALYR PNSKGALSTT QETGKRLAAC ARQFNVPFVF 240 NQVRVDGESE EFLSSSLKLI QGEALVVNCM LHLPHMSCHS RDAVRFFLGK MAALRPRVLA 300 IVEEDLSCTS TTFTGRFHEA LYHYSTLFDS LEATLASEDE MRSLVERVFL GPRIKNTVTS 360 AVSRSPLEKE ANRWSGLAEA VGFQQRSFSS YNRCQARLLV GLFQDGHQIQ EDEDTMLLCW 420 KSRPLIAASV WSSSSDPA*
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