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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
919576 |
Common Name | ARALYDRAFT_919576 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
Dof |
Protein Properties |
Length: 376aa MW: 40009 Da PI: 8.1746 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
919576 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124.1 | 4.4e-39 | 70 | 129 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++ +kcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk s
919576 70 DHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPS 129
6789*****************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MGLTSLQVCM DSDWLQEAES SGGSMLDSST TSPSAADILA ACGTRPQASA VAVAAAALMD 60 GGRRLRPPHD HPQKCPRCES THTKFCYYNN YSLSQPRYFC KTCRRYWTKG GTLRNIPVGG 120 GCRKNKKPSS SNSSPSTSSG KKTSNIVTTN TTDLMALAHS HQNYQNYQNS PLGFSHFGGM 180 IGSYSTPEHG NVGFLESKYG GLLSQSPRPI DFLDSKFDLM GVNNDNLVMV DHGSNGDHRH 240 HSSHHMGLNH GLGLNNNNNN GGFNGISPGG NGNGGGLMDI SACQRLMLSN YDNHHYNHQE 300 DHQRVATIMD VKPNAKLLSL DWQQDQGYSN GGGSGSVGKS DGGGYGSGGY INGLGSSWNG 360 LMNGYGSSTK TNSLV*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression (PubMed:19915089). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification (PubMed:19915089). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:19915089, ECO:0000269|PubMed:30626969}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT020467 | 0.0 | BT020467.1 Arabidopsis thaliana At5g62940 gene, complete cds. |
GenBank | BT020576 | 0.0 | BT020576.1 Arabidopsis thaliana At5g62940 gene, complete cds. |