PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 915615
Common NameARALYDRAFT_915615
Organism
Arabidopsis lyrata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family G2-like
Protein Properties Length: 313aa    MW: 35392.2 Da    PI: 4.3335
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
915615genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.14e-08160183326
  G2-like   3 rlrWtpeLHerFveaveqLGGsek 26 
               +rW+peLHe F+eav++L G+ek
   915615 160 GMRWSPELHELFLEAVNKLEGPEK 183
              59*******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1105.1E-82860IPR001623DnaJ domain
SuperFamilySSF465651.57E-72872IPR001623DnaJ domain
Gene3DG3DSA:1.10.10.602.5E-5159183IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MVFACLKFAD TNRIVIAKSS FKLSNPLELA QAYEVLSDPE KREIYDEYGD DALKEGLIDD  60
EQGRSSQFSE DFLLSNPCDG GDSSLLTLSG DASSDLDLGC PNDNFSLTEQ LELQFLSDEL  120
ELGITDREIY QVNHGQNCVP ASMSVTAEPS LGSAVNHIPG MRWSPELHEL FLEAVNKLEG  180
PEKREMLEKS SQLAMERNKR KELYNAYKKL TSKYKFVCKR FGLTADSFLE DDGHWTKSEE  240
CCQVEQSICL LNSEPPIDDM IEDHDTTFVL YISVTCILLS FVNKIFLTIF FCSPFSLRLI  300
IYMRLIILRH VL*
Cis-element ? help Back to Top
SourceLink
PlantRegMap915615
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD7MHL60.0D7MHL6_ARALL; Predicted protein
STRINGscaffold_703357.10.0(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.23e-33G2-like family protein