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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
906718 |
Common Name | ARALYDRAFT_906718 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 274aa MW: 31165 Da PI: 4.786 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
906718 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 64.4 | 1.8e-20 | 11 | 100 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
ffkv+ + ++s+ lv+p +f e + +kt++l+ g+ W+v l +k sg++++++GW++F+k+++Lk g+f++F +dg+++f v+vf+
906718 11 FFKVF--LSETASDSLVIPLSFNEFLADP--LPKTVKLQGIGGKIWTVSL--EKISGAVYFATGWSKFAKDHELKNGEFMTFVYDGHRTF--EVSVFE 100
88999..88899999*******9766655..899****************..********************************998877..888876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MADNSDLYPR FFKVFLSETA SDSLVIPLSF NEFLADPLPK TVKLQGIGGK IWTVSLEKIS 60 GAVYFATGWS KFAKDHELKN GEFMTFVYDG HRTFEVSVFE RFGFKETRAE IQAIQLSDSH 120 SDSVVEEEED SSDVDDGSCG EDEEISQSLY PIDDEETKTD AAVFEGNLDI EALTNPHFPT 180 RLKNRIYELL IPANVVNDNK LKFGDSIKYI DGEGTLIGLK GKWADKRICF KGWDRICRRN 240 RLKKHQDTVE CELLHDDQKM VHSIRVHVLR RTD*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493647 | 1e-156 | AB493647.1 Arabidopsis thaliana At3g53310 mRNA for hypothetical protein, partial cds, clone: RAAt3g53310. |
GenBank | AY087586 | 1e-156 | AY087586.1 Arabidopsis thaliana clone 36830 mRNA, complete sequence. |
GenBank | BT025724 | 1e-156 | BT025724.1 Arabidopsis thaliana At3g53310 mRNA, complete cds. |