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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 903398 | ||||||||
Common Name | ARALYDRAFT_903398 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 725aa MW: 78747.4 Da PI: 6.2248 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.6 | 2.7e-13 | 227 | 288 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ k+ r+++NRe+A+ sRqRKk ++eeLeekv ++ + ++L +++ e a+l+++ 903398 227 EEDEKKKARLMRNRESAQLSRQRKKHYVEELEEKVRNMHSTITDLNGKISYFMAENATLRQQ 288 678899******************************************99999999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.5E-16 | 227 | 291 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.1E-11 | 228 | 289 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.3 | 229 | 289 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.75E-12 | 231 | 289 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.8E-17 | 231 | 289 | No hit | No description |
CDD | cd14704 | 1.22E-21 | 232 | 283 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 725 aa Download sequence Send to blast |
MAEPITEEQP PPPAPDPNST FPPPSDFDSI SIPPFDDHFY HSGSDHTPIG ELMSDLGFPD 60 GEFELTFDGM DDLYFPAENE SFLIPVNTSN QEQFGDFTPE SEGSGISGDC PVLPKDADKS 120 ITTSGCINRD SDDRCSGADR SLDLPTPLSS QGSGNCGSDV SEATNESSPK SRNVVVDQKV 180 KVEEAATTTS IITKRKKEID EDLTDESRNS KYRRSGEDAD ASAVTGEEDE KKKARLMRNR 240 ESAQLSRQRK KHYVEELEEK VRNMHSTITD LNGKISYFMA ENATLRQQLG GNGMCPPHIP 300 PPPMGMYPPM APMPYPWMPC PPYMVKQQGS QVPLIPIPRL KPQNTLGTSK AKKSESKKSE 360 AKTKKVASIS FLGLLFCLFL FGALAPIVNV NYGGISGAFY GNYRSNYITD QIYSQHRDRV 420 LDTSRSGTGT GVSNSNGMHC GRDSDRGARK NISATESSVP PGNGSEPLVA SLFVPRNDKL 480 VKIDGNLIIN SILASERAVA LRKASESKER KADLVISKDY SPALPLPDVG KTEEMAKHLY 540 RSKAEKQKAL SSGSTDTLKD QFKTKAANGE MQQWFREGVA GPMFSSGMCT EVFQFDVSST 600 SGAIIPASPA TNVSTEHGKN TTDTHKQKNR RILRGLPIPL PGSDFNLTKE HQRNSSSKEI 660 KPASSMVVSV LVDPREGGDG DIDGMIGGPK SLSRVFVVVL LDSAKYVTYS CVLPRSGAPH 720 LVTT* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 903398 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY136295 | 0.0 | AY136295.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds. | |||
GenBank | BT000408 | 0.0 | BT000408.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002881751.1 | 0.0 | bZIP transcription factor 17 | ||||
Swissprot | O22208 | 0.0 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | D7LGH5 | 0.0 | D7LGH5_ARALL; BZIP transcription factor family protein | ||||
STRING | scaffold_402899.1 | 0.0 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8881 | 27 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 0.0 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | 903398 |
Entrez Gene | 9317817 |