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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
901333 |
Common Name | ARALYDRAFT_901333 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 530aa MW: 60079.8 Da PI: 7.59 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
901333 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 33.6 | 7e-11 | 471 | 525 | 14 | 70 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHH CS
B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvk 70
+++lp +f++ +g+++ k++++ d++g +W+ l+ +k ++r+ l +GWkeF++
901333 471 FNMTLPIPFTKVNGIQN--AKKMSFLDKHGVKWSTSLRLEKDRQRMRLVGGWKEFCD 525
569*******9999885..558**********************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 530 aa
Download sequence Send
to blast |
MAEPEIEKMT SSVSKLQLSP PPSVRKEKTF SMPDWSLLPE ELLNLISKHL EDYCFDVVHA 60 RSVCTLWRSI FPFPASLLRP SYSLPSLTKF PYESKDLCTL EKIPLFLFRV RAPHADASEY 120 FLGGIGRDDD DHIELPSPLQ CSVKVKIPDS DPTLINTLDC QVLSLGHQYR MIGCNPKYYK 180 GVAFLPLNKF GGGEEFVVLL NYTKTLLVLR SIEMRWMLLE IPSYGSCSDL ITFRGRFYAA 240 FSNHDIFAID PYSLEATPLM PSEALLDCGS VNDLVPSGND ELFLVEKIIP RTGVIYLYRL 300 TLRLSRLDEE AGKWVEVSEI GDRLLVIGNL GNVCCSAKEL PDGCGLTGNS IVFTHGRKVT 360 YSYKYGVHTG REEDDLNCWR YSRDKCVTIL STSPVVALRK VKDLGILRMA KQHFFKPLLP 420 GFYSHLIDGQ RLTDGWKEFA LSHDLLTLLF SDKREICVST LQCWDLVVVR FNMTLPIPFT 480 KVNGIQNAKK MSFLDKHGVK WSTSLRLEKD RQRMRLVGGW KEFCDVKIG*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC006954 | 8e-48 | AC006954.8 Arabidopsis thaliana chromosome 2 clone F25P17 map mi238, complete sequence. |
GenBank | AK117514 | 8e-48 | AK117514.1 Arabidopsis thaliana At2g24650 mRNA for unknown protein, complete cds, clone: RAFL17-15-N14. |
GenBank | CP002685 | 8e-48 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |