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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
901324 |
Common Name | ARALYDRAFT_901324 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 334aa MW: 38645.4 Da PI: 10.407 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
901324 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 37.4 | 4.5e-12 | 25 | 73 | 40 | 96 |
ETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 40 desgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
d s ++W+vk+ ++++ lt+GW eF+ a++L+ gD++vF+ +++++f +v++
901324 25 DASKKTWKVKI--DGQR----LTNGWTEFALAHDLRIGDIIVFRQERSMTF--HVTM 73
5889*******..8888....***********************5555666..7765 PP
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2 | B3 | 51.1 | 2.4e-16 | 141 | 190 | 40 | 90 |
ETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 40 desgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
+++grsW+v l+ +k+ g++++++GW++F++angL++g f++Fkl++r ++
901324 141 QRKGRSWTVALKRKKSCGTTYIRRGWRSFCHANGLRAGSFFTFKLIER-GG 190
579********98999999**************************986.33 PP
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3 | B3 | 59.8 | 4.8e-19 | 232 | 327 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
+ v+ ++++ ++ l+lp +f++ ++++k++ ++++ d++g +W+ +l ++ k +r+ l++GWkeF+ an++k g++++++l+++++++ v+k+++k
901324 232 VRVTPTPYNVGQSKLILPVPFTKVNDIIKAK--KMSFLDKHGVKWSTNLWFEEKCKRMRLSGGWKEFCYANDVKIGESIILELIWETDRSSVLKFCSK 327
56666788888889********999999665..8***************8899999******************************999999999986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MVNQHFFKPL LPGFHSHLTA ELRSDASKKT WKVKIDGQRL TNGWTEFALA HDLRIGDIIV 60 FRQERSMTFH VTMLGPSCYE IQYVSCLDNQ NNLGKIQRKK KEAESSLDLS CFIANVTPSN 120 LRYDSLDKWS RQKMWRYDSD QRKGRSWTVA LKRKKSCGTT YIRRGWRSFC HANGLRAGSF 180 FTFKLIERGG TLGLRLSHRE LDEEANAIDN NQDERSSRHV KASSLPPQNR FVRVTPTPYN 240 VGQSKLILPV PFTKVNDIIK AKKMSFLDKH GVKWSTNLWF EEKCKRMRLS GGWKEFCYAN 300 DVKIGESIIL ELIWETDRSS VLKFCSKVKP ENK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC007266 | 1e-82 | AC007266.5 Arabidopsis thaliana chromosome 2 clone F27A10 map mi238, complete sequence. |
GenBank | CP002685 | 1e-82 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |