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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
898397 |
Common Name | ARALYDRAFT_898397 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 330aa MW: 37775.7 Da PI: 9.4392 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
898397 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 74.5 | 1.3e-23 | 88 | 178 | 3 | 95 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
+ ++s++ + + l lp +f++++g +++++ +++l +e+g+sW+v l+ +k+ g++++++GW++F++angL++g +++Fkl++r +++l+++
898397 88 VANVTSSNIRYDSLNLPMRFVRANGVDTRCG-EMILINENGKSWTVDLKRKKSCGTTYIRRGWRSFCHANGLRAGSSFTFKLIQR-GATLCLR 178
56789*******************9998887.****************98999999**************************995.5545555 PP
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2 | B3 | 55.1 | 1.4e-17 | 246 | 326 | 17 | 99 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
vlp +f++ ++++k++ +++l d++g +W++kl ++ ++r+ l +GWkeF+ ang+k g++++++l++++e++ v+k+++k
898397 246 VLPIPFTKVNDIVKAK--KMSLLDKHGVKWSIKLWFEVERKRMRLVGGWKEFCYANGVKIGESIILELIWETEESSVLKFCSK 326
89*****999999665..8***************88999999****************************9888899999986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MLKELRDLQR FAEIVSPPAG RKWVSEELAV ISESKEVAAD MITDTVLDQM CSYSGFSLFF 60 SGNNQRTKKV RKNPREEAES SLDLSYFVAN VTSSNIRYDS LNLPMRFVRA NGVDTRCGEM 120 ILINENGKSW TVDLKRKKSC GTTYIRRGWR SFCHANGLRA GSSFTFKLIQ RGATLCLRLS 180 PRELKEEDCL SEPETNQDER SSQECTKRKF KNCFVTVTLT PYNIEQSKLV LLILHSCLPR 240 LNVSQVLPIP FTKVNDIVKA KKMSLLDKHG VKWSIKLWFE VERKRMRLVG GWKEFCYANG 300 VKIGESIILE LIWETEESSV LKFCSKVHF*
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