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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
89813 |
| Common Name | MICPUN_89813, NFYB |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
|
| Family |
NF-YB |
| Protein Properties |
Length: 139aa MW: 15371.1 Da PI: 4.7752 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 89813 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 188.8 | 3.9e-59 | 20 | 116 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
vreqdrflPian+srimkk+lPanaki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa++tlGfe+yveplkvyl+kyre+egek
89813 20 VREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEEYVEPLKVYLHKYRETEGEK 116
69********************************************************************************************997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 139 aa
Download sequence Send
to blast |
MSDANDPDVD DDDDDKGGNV REQDRFLPIA NISRIMKKAL PANAKIAKDA KETVQECVSE 60
FISFITSEAS DKCQREKRKT INGDDLLWAM STLGFEEYVE PLKVYLHKYR ETEGEKATSI 120
KHGDAAAKKA DVSGKQTS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP001574 | 0.0 | CP001574.1 Micromonas sp. RCC299 chromosome 1, complete sequence. |
| Publications
? help Back to Top |
- Worden AZ, et al.
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas.
Science, 2009. 324(5924): p. 268-72
[PMID:19359590] - Han X, et al.
Overexpression of the poplar NF-YB7 transcription factor confers drought tolerance and improves water-use efficiency in Arabidopsis.
J. Exp. Bot., 2013. 64(14): p. 4589-601
[PMID:24006421] - Hwang YH, et al.
Functional conservation of rice OsNF-YB/YC and Arabidopsis AtNF-YB/YC proteins in the regulation of flowering time.
Plant Cell Rep., 2016. 35(4): p. 857-65
[PMID:26754793] - Hossain MA, et al.
Identification of Novel Components of the Unfolded Protein Response in Arabidopsis.
Front Plant Sci, 2016. 7: p. 650
[PMID:27242851] - Zhao H, et al.
The Arabidopsis thaliana Nuclear Factor Y Transcription Factors.
Front Plant Sci, 2016. 7: p. 2045
[PMID:28119722]
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