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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
895391 |
| Common Name | ARALYDRAFT_895391 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
ZF-HD |
| Protein Properties |
Length: 310aa MW: 33866.7 Da PI: 8.5835 |
| Description |
ZF-HD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 895391 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | ZF-HD_dimer | 103.4 | 1.5e-32 | 73 | 128 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
+vrY+eClkNhAas+Gg + DGCgEfmps geegt++al+CaAC+CHRnFHR+e++
895391 73 PTVRYRECLKNHAASVGGSVHDGCGEFMPS-GEEGTIEALRCAACDCHRNFHRKEMD 128
579**************************9.999********************986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MDMRSHEMIE RRREDNGNNN GGGVISNIIS TNDDNCNGNN NNNNTRVSCN SQTLDHHQSK 60
SPSSFSISAA AKPTVRYREC LKNHAASVGG SVHDGCGEFM PSGEEGTIEA LRCAACDCHR 120
NFHRKEMDGV GSSDLISHHR HHHHHHNQYG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH 180
KYGMSPPGGG GMVTPMSVAY GGGGGGGAES SSEDLNLYGQ SSGEGAGAAA GQMAFSMSSS 240
KKRFRTKFTT EQKERMMEFA EKLGWRMNKQ DEEELKRFCG EIGVKRQVFK VWMHNNKNNA 300
KKPPTPTTL*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor. Binds DNA at 5'-ATTA-3' consensus promoter regions. Regulates floral architecture and leaf development. Regulators in the abscisic acid (ABA) signal pathway that confers sensitivity to ABA in an ARF2-dependent manner. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:21059647, ECO:0000269|PubMed:21779177}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by abscisic acid (ABA) and ARF2. {ECO:0000269|PubMed:21779177}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC025814 | 0.0 | AC025814.7 Arabidopsis thaliana chromosome 1 BAC F22H5 genomic sequence, complete sequence. |
| GenBank | AK229038 | 0.0 | AK229038.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-33-K14. |
| GenBank | AY084462 | 0.0 | AY084462.1 Arabidopsis thaliana clone 10873 mRNA, complete sequence. |
| GenBank | BT028894 | 0.0 | BT028894.1 Arabidopsis thaliana unknown protein (At1g75240) mRNA, complete cds. |
| GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
