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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
892188 |
Common Name | ARALYDRAFT_892188 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 126aa MW: 14577.7 Da PI: 6.3516 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
892188 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 34.8 | 3e-11 | 20 | 113 | 2 | 85 |
EEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
B3 2 fkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85
+k lt sd ++ g ++lpk+ +e++ +g+ ++++ + e ++++l k+sgry+l++GW ++vka+g k++D + ++ d
892188 20 KKNLTESDLSRYGFVILPKQDFEKIiphmerglvenlgNGV---EVKVHIVEEGHesDDYTLTL--IKCSGRYMLRGGWYNMVKAKGYKTNDEIGLTWD 113
5889999********************99997766553333...23333333333226666666..**************************8888855 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 126 aa
Download sequence Send
to blast |
MAQELDLELG LAPYDPWVLK KNLTESDLSR YGFVILPKQD FEKIIPHMER GLVENLGNGV 60 EVKVHIVEEG HESDDYTLTL IKCSGRYMLR GGWYNMVKAK GYKTNDEIGL TWDKWTRRFL 120 LHHIN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC015448 | 1e-142 | AC015448.4 Arabidopsis thaliana chromosome I BAC T14L22 genomic sequence, complete sequence. |
GenBank | CP002684 | 1e-142 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
GenBank | F5F19 | 1e-142 | AC006216.1 Arabidopsis thaliana chromosome 1 BAC F5F19 sequence, complete sequence. |