PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 890619 | ||||||||
Common Name | ARALYDRAFT_890619, WRKY14 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | WRKY | ||||||||
Protein Properties | Length: 426aa MW: 46329.1 Da PI: 5.2276 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.5 | 4.2e-31 | 214 | 272 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs+fpr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ 890619 214 SDLWAWRKYGQKPIKGSPFPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 272 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038153 | 6.7E-266 | 1 | 425 | No hit | No description |
Gene3D | G3DSA:2.20.25.80 | 7.3E-31 | 207 | 274 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 32.879 | 208 | 274 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.4E-26 | 211 | 274 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.3E-38 | 213 | 273 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.4E-26 | 215 | 272 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPPNIWP LPLPHPPPSP SDLHINPFGD 60 PFVSMNDPLL QELNSVTNSS YFSNAGDNNN NNNGFLVPKV FEEDHIKSQC SIFPRIRISH 120 SNIIHDSSPC NSPAMSAHVV AAAAAASPRG IINVDTNSPR NCLLVDGNTF SSQIQISSPR 180 NLGLKRRKSQ AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PFPRGYYRCS 240 SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPIQRNAL AGSTRSSSSS SNPNPSKPST 300 ANITSSSIGS QNTIYLSSST IPPPSLSSSA VKDEREDDMQ LENIEDDEDN QIAPYIPELH 360 DHQHQPDDFF ADLEELEGDS LSMLLSQGCT GDGKDKTTAS DGISNFFGWS GDNNDNYHDQ 420 DSRSL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 1e-25 | 188 | 274 | 2 | 79 | Disease resistance protein RRS1 |
5w3x_D | 1e-25 | 188 | 274 | 2 | 79 | Disease resistance protein RRS1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00171 | DAP | Transfer from AT1G30650 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 890619 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK228343 | 0.0 | AK228343.1 Arabidopsis thaliana mRNA for putative DNA-binding protein, complete cds, clone: RAFL14-76-G23. | |||
GenBank | BT006468 | 0.0 | BT006468.1 Arabidopsis thaliana At1g30650 gene, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002890885.1 | 0.0 | probable WRKY transcription factor 14 | ||||
Swissprot | Q9SA80 | 0.0 | WRK14_ARATH; Probable WRKY transcription factor 14 | ||||
TrEMBL | D7KFM6 | 0.0 | D7KFM6_ARALL; WRKY DNA-binding protein 14 | ||||
STRING | scaffold_103413.1 | 0.0 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3085 | 28 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 0.0 | WRKY DNA-binding protein 14 |
Link Out ? help Back to Top | |
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Phytozome | 890619 |
Entrez Gene | 9326947 |
Publications ? help Back to Top | |||
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