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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
888314 |
Common Name | ARALYDRAFT_888314 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 147aa MW: 17235.8 Da PI: 8.6538 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
888314 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 36.7 | 7.4e-12 | 25 | 115 | 2 | 82 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82
k+l+ sd +++l+lpk+ +e++ + +++++l+d ++ s++v+l + + g+y+l+kGW+ +++ Lk+gD + +
888314 25 TKKLSDSDLCYRAQLYLPKQEMEQFilpemendlvrK--LGAGVEIKLRDIDNvsdDSYTVRL--KVRNGQYYLEKGWRLIKNDKCLKTGDHIGL 115
589999*****************99998877766432..237899***99988888*******..999999********************8755 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 147 aa
Download sequence Send
to blast |
MAKNNDINLD LSLSQYVEDD PWVLTKKLSD SDLCYRAQLY LPKQEMEQFI LPEMENDLVR 60 KLGAGVEIKL RDIDNVSDDS YTVRLKVRNG QYYLEKGWRL IKNDKCLKTG DHIGLFWDKL 120 TGEFKFKHSE SQSIVKRVLI RHRRTN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493445 | 1e-127 | AB493445.1 Arabidopsis thaliana At1g10455 gene for hypothetical protein, partial cds, clone: RAAt1g10455. |
GenBank | AC007067 | 1e-127 | AC007067.4 Genomic sequence for Arabidopsis thaliana BAC T10O24 from Chromosome 1, complete sequence. |
GenBank | AF170550 | 1e-127 | AF170550.1 Arabidopsis thaliana germin-like protein 7 (GLP7) gene, complete cds. |
GenBank | CP002684 | 1e-127 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |