PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 884485
Common NameARALYDRAFT_683929
Organism
Arabidopsis lyrata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 369aa    MW: 41363.8 Da    PI: 10.008
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
884485genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.51.1e-11292337449
             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
             +k++rrk+kNRe+A rsR+RK+a++ eLe + ++L++  ++L k+ 
  884485 292 DKKQRRKIKNRESAARSRARKQAQTMELEVEHENLKKAYEELLKQH 337
             79************************************99766543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-7289353IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.657291343IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-10291342No hitNo description
PfamPF001703.4E-9292342IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-9293342No hitNo description
CDDcd147071.36E-17293347No hitNo description
PROSITE patternPS000360296311IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MDSYLRLKNL VNDLPVSTSL SRQGSIYSWT VDQFQTSLGK DCGSMNMDEL VKMISSAEET  60
QEGSQRQVST TLPRTLSQKT VNEVWKYILE EEHTKNNGGV TNIPNLQRQQ TLGEITLEEF  120
FIRAGERGNN TNGGSIHDSS SSISGNPNTS LGVHIQPKAM VTDIMNNMVP RSLESNLHQN  180
VNGLMSTYQP QQSIMSMPNG YSYGKQIRFT NGFMGIDQRL QEKKRSLVPS VTTIPGAITC  240
SPVTPFPTLN GIQKIDGESS LLSRSPYISN GSTSTRCGKI HNDITAEKQF VDKKQRRKIK  300
NRESAARSRA RKQAQTMELE VEHENLKKAY EELLKQHVEM RKRQIEPGML NLQGGPERKL  360
RRTKSDIK*
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap884485
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ4195990.0AJ419599.1 Arabidopsis thaliana mRNA for basic leucine zipper transcription factor (atbzip15 gene).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002865471.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 8
SwissprotQ9FMM70.0AI5L8_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 8
TrEMBLD7MQS10.0D7MQS1_ARALL; Predicted protein
STRINGAl_scaffold_0008_7490.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156311417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42910.10.0bZIP family protein