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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
881859 |
| Common Name | ARALYDRAFT_681303 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
HD-ZIP |
| Protein Properties |
Length: 191aa MW: 22726.8 Da PI: 7.5544 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 881859 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.2 | 1.4e-18 | 12 | 64 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++ +q+++Le F++++++ +e++ ++A+++gL +qV vWFqNrRa++k
881859 12 KRRLSVDQVNTLEMNFKEENKLEQERKVRIADETGLHPKQVAVWFQNRRARWK 64
568999**********************************************9 PP
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| 2 | HD-ZIP_I/II | 121.4 | 4.6e-39 | 11 | 102 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrls +qv++LE++F+ee+kLe+erKv++a e gl+p+qvavWFqnrRAR+ktkqlE+dy +Lk++yd+lk e ++Le+e++ L+++lke
881859 11 KKRRLSVDQVNTLEMNFKEENKLEQERKVRIADETGLHPKQVAVWFQNRRARWKTKQLERDYCVLKAHYDSLKLEYNNLEHETQVLTSKLKE 102
9***************************************************************************************9997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MEEDTFSLGG KKRRLSVDQV NTLEMNFKEE NKLEQERKVR IADETGLHPK QVAVWFQNRR 60
ARWKTKQLER DYCVLKAHYD SLKLEYNNLE HETQVLTSKL KELRAKVREE KREEEHTMSL 120
KEQKRETEEE NDKIFQMVPT SHNGLCSSTT LGSMAEPCQF RNYPEKEIIM VKLKELRNLN 180
YVDYASNLQW *
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
