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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
869709 |
| Common Name | ARALYDRAFT_669153 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
WOX |
| Protein Properties |
Length: 374aa MW: 41487.6 Da PI: 9.0578 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 869709 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.6 | 4.3e-18 | 53 | 113 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++++eq+++Le+ F++ +p +ee++++ ++l ++ +++V++WFqNr+ + k+
869709 53 KPRWNPKPEQIRILEAIFNSgMVNPPREEIRRIRAQLqeygQVGDANVFYWFQNRKSRSKH 113
89*****************99*************************************995 PP
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| 2 | Wus_type_Homeobox | 112.4 | 2.3e-36 | 52 | 114 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+++RW+P+peQi+iLe++++sG+++P++eei+ri+a+L+eyG+++d+NVfyWFQNrk+R+++k
869709 52 PKPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
689**********************************************************99 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0010075 | Biological Process | regulation of meristem growth |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP EPKPRWNPKP 60
EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV FYWFQNRKSR SKHKLRLLHN 120
HSKHSLPQPQ PQPQPSASSS SSSSSSSSKS TKPRKNKNKN NTNLSLGGSQ MMGMFPPEPA 180
FLFPVSTVGG FEGITVSSQL GFLSGDMIEQ QKPAPTCTGL LLSEIMNGSV SYGTHHQQHL 240
SEKEVEEMRM KMLQQPQPQI CYATTNHQIA SYNNDNNTML HIPPSTSTTT TITTSHSLAT 300
VPSTSDQLQV QAGARIRVFI NEMELEVSSG PFNVRDAFGE EVVLINSAGQ PIVTDEYGVA 360
LHPLQHGASY YLI*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Homeodomain transcription factor required for meristem growth and early development (PubMed:15753038). Promotes cell proliferation and prevents premature differentiation in meristematic tissues during postembryonic development (PubMed:15753038). Essential for maintaining tissue growth during embryogenesis (PubMed:17706632). May act by repressing TSS to promote meristematic proliferation (PubMed:21185286). Involved in the transcriptional activation of a subset of cytokinin response factors (PubMed:20110319). May act as a negative regulator of cytokinin signaling in the dark (PubMed:21057190). {ECO:0000269|PubMed:15753038, ECO:0000269|PubMed:17706632, ECO:0000269|PubMed:20110319, ECO:0000269|PubMed:21057190, ECO:0000303|PubMed:21185286}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in the zygote after fertilization by the transcription factor WRKY2. {ECO:0000269|PubMed:21316593}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY251401 | 0.0 | AY251401.1 Arabidopsis thaliana WOX9 protein mRNA, complete cds. |
| Publications
? help Back to Top |
- Wang W, et al.
Dwarf Tiller1, a Wuschel-related homeobox transcription factor, is required for tiller growth in rice.
PLoS Genet., 2014. 10(3): p. e1004154
[PMID:24625559] - Zhu T,Moschou PN,Alvarez JM,Sohlberg JJ,von Arnold S
Wuschel-related homeobox 8/9 is important for proper embryo patterning in the gymnosperm Norway spruce.
J. Exp. Bot., 2014. 65(22): p. 6543-52
[PMID:25205582] - Raines T, et al.
The cytokinin response factors modulate root and shoot growth and promote leaf senescence in Arabidopsis.
Plant J., 2016. 85(1): p. 134-47
[PMID:26662515] - Dolzblasz A, et al.
Stem Cell Regulation by Arabidopsis WOX Genes.
Mol Plant, 2016. 9(7): p. 1028-39
[PMID:27109605] - Blein T,Pautot V,Laufs P
Combinations of Mutations Sufficient to Alter Arabidopsis Leaf Dissection.
Plants (Basel), 2013. 2(2): p. 230-47
[PMID:27137374]
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