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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
867069 |
| Common Name | ARALYDRAFT_666513 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
WRKY |
| Protein Properties |
Length: 269aa MW: 30503.3 Da PI: 6.175 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 867069 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 88.6 | 5.3e-28 | 134 | 194 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dD y+WrKYGqKe+ gs+fpr+YYrCt++ +Cp+kk+v+r +edp+++ itY+++H+++
867069 134 DDNYTWRKYGQKEILGSRFPRAYYRCTHQklyKCPAKKQVQRLDEDPHTFRITYRSSHTCH 194
8****************************9999**************************96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MEEIMSMIFN GINLVKELEF SLSSQESPES DLSSYLSSIS TLFGDANERL KILLAWRNSL 60
AQYQPEPEPV PMFDIPMQND QSLMQDHWFN FRYPVMQTVE GNATSRPRHQ RRKKDIGEEE 120
TVLAAVERIE IPPDDNYTWR KYGQKEILGS RFPRAYYRCT HQKLYKCPAK KQVQRLDEDP 180
HTFRITYRSS HTCHSFTTSP ISSLAPATAT TANVPDVANM AEAMFGNMDS VVPLGKPCFN 240
HHCLVPGDDG DGEGTHGTHL RRDTTCPS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB076907 | 8e-99 | AB076907.1 Arabidopsis thaliana IRK gene for inflorescence and root apices receptor-like kinase, complete cds. |
| GenBank | AL163972 | 8e-99 | AL163972.1 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19. |
| GenBank | CP002686 | 8e-99 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
| GenBank | DQ446768 | 8e-99 | DQ446768.1 Arabidopsis thaliana clone pENTR221-At3g56390 hypothetical protein (At3g56390) mRNA, complete cds. |
| GenBank | DQ653153 | 8e-99 | DQ653153.1 Arabidopsis thaliana clone 0000010596_0000007714 unknown mRNA. |
| Publications
? help Back to Top |
- Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
An extracellular subtilase switch for immune priming in Arabidopsis.
PLoS Pathog., 2013. 9(6): p. e1003445
[PMID:23818851] - Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
Correction: An Extracellular Subtilase Switch for Immune Priming in Arabidopsis.
PLoS Pathog., 2016. 12(11): p. e1006003
[PMID:27806116]
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