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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
861370 |
Common Name | ARALYDRAFT_660814 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 302aa MW: 34569.6 Da PI: 10.3146 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
861370 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 61.3 | 1.6e-19 | 19 | 113 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
f+k l++ d+++++ +p +f+++++ + e s ++++ ++g+sW+vk+ +k+++ ++ ++GW+ Fv++n L + +f++F+++g+++f +v +f+k
861370 19 FVKLLKHFDMSSENTRAIPYDFVRNFSDN-ELSGNMKIRVQWGNSWKVKI--SKNPRFyFMEKSGWETFVRDNALGDYEFLTFTHKGKMSF--TVNIFNK 113
8999999****************887655.5777****************..******555569*********************999999..9999976 PP
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2 | B3 | 41.1 | 3.2e-13 | 221 | 290 | 14 | 86 |
T-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
B3 14 grlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
+ l +p +fa++++ k e++++++ +++g +sW+v + k++++++++GWk +++ + gD++ F+l++
861370 221 KSLAIPTTFANDYMPK--EKTMVKIHHPDGkKSWNVAF--VVKKKGHIFSGGWKCLCREYPVVFGDTCKFTLIK 290
3489******999744..5679*******999******..888888*************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MASNPDFLWC KEERKQESFV KLLKHFDMSS ENTRAIPYDF VRNFSDNELS GNMKIRVQWG 60 NSWKVKISKN PRFYFMEKSG WETFVRDNAL GDYEFLTFTH KGKMSFTVNI FNKDGKEMMQ 120 PPQSRAFLAS SSRIKTEQDV KREEVLVSSD SSSRGPTTAA VSNGNGEGMY KRKLNFGKKK 180 AEETQNSKRT ERVVSRQRVY AGAPSSSVAE FNIFISKSYI KSLAIPTTFA NDYMPKEKTM 240 VKIHHPDGKK SWNVAFVVKK KGHIFSGGWK CLCREYPVVF GDTCKFTLIK PYELLLAVSR 300 P*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ056675 | 0.0 | DQ056675.1 Arabidopsis thaliana transcriptional factor B3 family protein (At5g09780) mRNA, complete cds. |