|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
859566 |
Common Name | ARALYDRAFT_659010 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
Family |
B3 |
Protein Properties |
Length: 283aa MW: 31935.4 Da PI: 9.453 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
859566 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 41.5 | 2.3e-13 | 26 | 95 | 16 | 94 |
EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 16 lvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
+ +pk f +++ g ++ + l++ s +W++k+ ++++ +tkGW+eF+ ++L++gD++vF+++g+ l++
859566 26 ILIPKAFYSKYleGRQEGN--AAELRSdASEITWNIKI--DGRR----MTKGWEEFAVGHNLQVGDILVFRHEGN----LLF 95
789********96555444..5666554999*******..9998....9**********************7663....333 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MANSMFSSSA KPHFLKPILP GFKTYILIPK AFYSKYLEGR QEGNAAELRS DASEITWNIK 60 IDGRRMTKGW EEFAVGHNLQ VGDILVFRHE GNLLFHVTPF GLSCCEILYS QNDEKVVKDK 120 TGKVTRYKTV KKTAKNECSS VDTDFVVPVT ASNQRLDSFY LPRGFTTSSG LSKLCNEIIL 180 MDEKSRPSTL KLCYHKSRKP PVLRIYPLER DEDNIGNHSK KIKQEVEHET VKEETNVESG 240 KLKRDGLLKK DPQKVCSSSH DTIFVVPGTA SNQRNDSFVR SP*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AB046432 | 1e-114 | AB046432.1 Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F22D12. |
GenBank | CP002688 | 1e-114 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
GenBank | F18O9 | 1e-114 | AF296831.1 Arabidopsis thaliana BAC F18O9. |