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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
856135 |
Common Name | ARALYDRAFT_655509 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 142aa MW: 16283.3 Da PI: 5.7452 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
856135 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 49.9 | 5.7e-16 | 40 | 114 | 13 | 96 |
TT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 13 sgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
+ +p f+++h +gk+ ++kt+ l++ s ++W vk+ ++ lt+GW++F+ +++L+ gD+vvF+++g++ f +v++
856135 40 H---NIPVAFFSKHvEGKNDQNKTVNLRSdASEKTWLVKM--DGLN----LTDGWEDFAFSHDLRIGDIVVFRHEGEMVF--HVTA 114
4...49*********8888899******97888*******..5555....***********************9998888..6655 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 142 aa
Download sequence Send
to blast |
MADQSLLHSP IKPHFFKPLL EGFRTHLVLC STLFSYISEH NIPVAFFSKH VEGKNDQNKT 60 VNLRSDASEK TWLVKMDGLN LTDGWEDFAF SHDLRIGDIV VFRHEGEMVF HVTALGPSCC 120 EIQYYTSSHN INDDDRNDQT NI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC006535 | 1e-108 | AC006535.7 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome I, complete sequence. |
GenBank | BT002947 | 1e-108 | BT002947.1 Arabidopsis thaliana clone RAFL15-02-G15 (R20317) unknown protein (At1g26680) mRNA, complete cds. |
GenBank | CP002684 | 1e-108 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |