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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
84991 |
Common Name | SELMODRAFT_449949 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
GRAS |
Protein Properties |
Length: 349aa MW: 39209.4 Da PI: 6.2575 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
84991 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 320.9 | 2.7e-98 | 20 | 346 | 33 | 373 |
GRAS 33 pdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasR 135
p+ +p++R+ +++ +AL++r+++ ++++ + ++s++ ++a+++f++ +P+lkf+h+taNqaIle++ g++++Hi+D+di qG+QWp+L+qaL++
84991 20 PHLsSPIERVSTHICKALSERITK--TSIF---DA-----TTSDDLAFARRAFYQHFPFLKFAHFTANQAILESLRGCSKLHIVDLDIDQGMQWPSLIQALSQ- 112
333379******************..2222...22.....2368999******************************************************98. PP
GRAS 136 pegppslRiTgvgspesgskeeleetgerLakfAeelgv.pfefnvlvakrledleleeLrvkp....gEalaVnlvlqlhrlldesvsleserdevLklvksl 234
e++pslRiTgvgs s el++tg+rL++fA+++g +++++++ ++ ++l+++++++ + laVn+++ lhrll ++ +le +L +++
84991 113 IENAPSLRITGVGS----SLAELQSTGRRLTEFATSIGYhKLDYHPVRLDSPDQLDPSAFSLGDdddqDLGLAVNCSMFLHRLLGNHPALER----TLCMIRAW 208
6889**********....9*******************747******999**********998865444469************88888888....******** PP
GRAS 235 sPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqak 338
+P++v+v+e ea+hn++sF++rf+eal++ysa+fd+le+ l+r++ +ri +E ++++ ei++++acega+r+ rh + e+Wr+ ++ +GFk v ls++ qa+
84991 209 NPRIVTVSEMEANHNTPSFVDRFVEALHFYSAVFDCLESALARTDPDRIYIEGAMFAGEIRSILACEGADRIVRHARSESWRDFMRWSGFKDVGLSDHSLYQAH 312
******************************************************************************************************** PP
GRAS 339 lllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
l ++ + yr+ e+++l+lgW+d p+vs+S W
84991 313 VFLTLYS-QAYRLTREEQALILGWHDTPVVSISTW 346
*******.55************************* PP
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Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MATSKLILDH LAASSRDHPP HLSSPIERVS THICKALSER ITKTSIFDAT TSDDLAFARR 60 AFYQHFPFLK FAHFTANQAI LESLRGCSKL HIVDLDIDQG MQWPSLIQAL SQIENAPSLR 120 ITGVGSSLAE LQSTGRRLTE FATSIGYHKL DYHPVRLDSP DQLDPSAFSL GDDDDQDLGL 180 AVNCSMFLHR LLGNHPALER TLCMIRAWNP RIVTVSEMEA NHNTPSFVDR FVEALHFYSA 240 VFDCLESALA RTDPDRIYIE GAMFAGEIRS ILACEGADRI VRHARSESWR DFMRWSGFKD 300 VGLSDHSLYQ AHVFLTLYSQ AYRLTREEQA LILGWHDTPV VSISTWSC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU262744 | 8e-09 | Selaginella moellendorffii putative DELLA protein mRNA, complete cds |