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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
84560 |
Common Name | LAS-2, SELMODRAFT_95651 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
GRAS |
Protein Properties |
Length: 468aa MW: 51046.7 Da PI: 6.2673 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
84560 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 335.3 | 1.1e-102 | 61 | 465 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal.....................kl 83
l+elL+ecA v+s+d ++a ++L +ls asp+gd+++Rla+yf ALa+ l + ++ +++ +++ +n l + +
84560 61 LRELLVECAASVTSSDWHRAIRCLVHLSRAASPHGDAVERLAFYFSAALARCLCSLSTPCASEIRSLLRL-NNLHFLLEEDqpppsfeddlfyysggaeeayLA 163
689****************************************************777777777665554.343333333356666677777778888766455 PP
GRAS 84 fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRp.......egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
+++v+P+++fshl aNqaIleav++e++vHi+D++i+qGlQWp+L+qaL + + + +lRiTg g+ s le+tg rL++fA++l+++fef+
84560 164 LNQVTPFIRFSHLSANQAILEAVDNERAVHIVDLGIMQGLQWPPLMQALPpT-LsssssssSTTLTLRITGTGP----SISLLEQTGARLRDFARTLHLDFEFD 262
************************************************9632.2233343233559********....9************************* PP
GRAS 180 vl..vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklprese 280
++ +++++ + ++L++++gEal+Vn++ qlh+ll +++ + + ++ L++++sl P++++v+e+e++h s+sFlerfl +l++y+a+fdslea+lp+ s
84560 263 AVctTSRHVVASLQQHLELRRGEALVVNCMTQLHKLL--PAAHRAALPHALEFMRSLCPRILTVAEKESEHdLSQSFLERFLVTLDHYVAVFDSLEATLPPRSP 364
*843333333345678*********************..66666778************************889****************************** PP
GRAS 281 erikvErellgreivnvvacegaerre.....rhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyr..veeesgslvlgWkdrpLvsvSaW 373
+r ++Er +l++ei+ +v g e rh+++++Wr+ +e+aGF+ vp s++a +qaklllr ++ dgyr ve+++gsl+l W+d+pLv++S W
84560 365 QRLMIERLVLAKEISGIVLEDGGGDDEnlavvRHQSFGNWRRDMEAAGFQLVPPSDFAIAQAKLLLRLHYpADGYRllVENQHGSLFLSWHDKPLVALSTW 465
******************998765433333449******************************************94346889****************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MQQQPPSSHQ HHHQEQPQFL GHTGGIGTGA GAGTGFGFGV GGAGSEGSSG GAGTHHNDGG 60 LRELLVECAA SVTSSDWHRA IRCLVHLSRA ASPHGDAVER LAFYFSAALA RCLCSLSTPC 120 ASEIRSLLRL NNLHFLLEED QPPPSFEDDL FYYSGGAEEA YLALNQVTPF IRFSHLSANQ 180 AILEAVDNER AVHIVDLGIM QGLQWPPLMQ ALPPTLSSSS SSSSTTLTLR ITGTGPSISL 240 LEQTGARLRD FARTLHLDFE FDAVCTTSRH VVASLQQHLE LRRGEALVVN CMTQLHKLLP 300 AAHRAALPHA LEFMRSLCPR ILTVAEKESE HDLSQSFLER FLVTLDHYVA VFDSLEATLP 360 PRSPQRLMIE RLVLAKEISG IVLEDGGGDD ENLAVVRHQS FGNWRRDMEA AGFQLVPPSD 420 FAIAQAKLLL RLHYPADGYR LLVENQHGSL FLSWHDKPLV ALSTWSC*
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