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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
83927 |
Common Name | SELMODRAFT_449643 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
GRAS |
Protein Properties |
Length: 410aa MW: 46007.8 Da PI: 7.0256 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
83927 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 311.9 | 1.5e-95 | 27 | 395 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102
+lLl+ Aea+ s+ l la+ +L rl+el +s++g +qRla yfteAL++ l + ++ k ++ +++ ++++a+++++e+sP++kf+h +aNqaI
83927 27 FHLLLAGAEAMFSQALDLAKVILFRLRELtssCSSSGPVFQRLALYFTEALQSLLDG--ARITKVA---SSCSMSYLDSITAFQALHEASPYIKFGHYVANQAI 125
699*************************97667788899*****************9..5555444...444445999************************** PP
GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVn 205
lea+ ++rvHi+D+d++ G+QWp+L+qaLa R++g+p+lRiT+v +p+s + + +et+erL + A+++++pf+f+ +++ ed +l L++ +gE+l+Vn
83927 126 LEAIGDDKRVHILDYDVTLGIQWPSLMQALALREGGTPHLRITAVYRPHSRhQLANFQETKERLMECAAAFKIPFSFHQAKVEDDEDSKLVGLKLIKGETLIVN 229
***********************************************99888999************************999999******************* PP
GRAS 206 lvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.adh.nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerre 307
++l+l +++++s s+ ++Lk v++ sP++v++ve+e +++ ++++ +++f++al++ysa++dslea+l e+ + i vEr++l+ +i+ ++ + + +
83927 230 CMLHLLHVPHKSPSSVL---SFLKSVQKFSPRLVTFVEEEvVSClSAPNTVDKFFQALHHYSAMLDSLEASL-CETTAHILVERAFLATRIKTALIAHHHA--- 326
********977777766...9*******************54557999***********************9.556789*************999888887... PP
GRAS 308 rhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.....eesgslvlgWkdrpLvsvSaWr 374
++ +W++ l++aGF+ v+ls ++ +qa+lll +k dgy+++ ee + l+l Wk+rpL+++SaW+
83927 327 --HSKVEWSSLLHSAGFHRVSLSRRNICQARLLLGLFK-DGYQLKehhsdEEIEKLLLSWKSRPLIAASAWT 395
..45678*******************************.******55444447899***************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MNFDDFQLPG DPELDLQHQE FFGCRLFHLL LAGAEAMFSQ ALDLAKVILF RLRELTSSCS 60 SSGPVFQRLA LYFTEALQSL LDGARITKVA SSCSMSYLDS ITAFQALHEA SPYIKFGHYV 120 ANQAILEAIG DDKRVHILDY DVTLGIQWPS LMQALALREG GTPHLRITAV YRPHSRHQLA 180 NFQETKERLM ECAAAFKIPF SFHQAKVEDD EDSKLVGLKL IKGETLIVNC MLHLLHVPHK 240 SPSSVLSFLK SVQKFSPRLV TFVEEEVVSC LSAPNTVDKF FQALHHYSAM LDSLEASLCE 300 TTAHILVERA FLATRIKTAL IAHHHAHSKV EWSSLLHSAG FHRVSLSRRN ICQARLLLGL 360 FKDGYQLKEH HSDEEIEKLL LSWKSRPLIA ASAWTCKNKS SDGSENEQQ*
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