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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
83267 |
Common Name | SELMODRAFT_83267 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
GRAS |
Protein Properties |
Length: 295aa MW: 33990.4 Da PI: 7.9385 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
83267 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 178.9 | 3.6e-55 | 4 | 283 | 89 | 374 |
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
P l+ + aNq+Il+a g++rvHi+D++i +G QWp+L++aL++R+egpp l+iTg++ p+ +le+tg+rL ++A+++g+++ef+ +++ ++e+ +++
83267 4 PSLRATERFANQMILDACRGAKRVHIVDYGILYGDQWPSLIKALSERAEGPPLLKITGIDFPS---LVNLEKTGNRLVDYAKSCGMHLEFHSIATAAWESAQPR 104
677777889****************************************************65...899***********************988899998776 PP
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..eerikvErellgrei 294
E l Vn++l++ ++ e++ ++s+r+ +L+ + s +P ++ + ad +s+ F +rf a + + a ++s+e+++ e + + +++++ +
83267 105 YH--LFSELLFVNCQLRMRHIR-EDGIIDSPRKLFLEKILSFKPVMFFQSVVHADIGSPFFIHRFDGAWRSFLARLESFEETMKLELidQSQLDFMDKFIEKCA 205
43..238*************96.9999****************************************************99987665555555555555***** PP
GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ ++ac g++r+er ++++W + ++ F+++p+s++a + + ++ + ++ ++ ++++l+lgWkd L ++S+W+
83267 206 MGAIACDGQNRVERISSYKTWDRLARKGQFGQLPVSKRALEMVMSVWSGHE--NFTYGMDENWLLLGWKDVVLNALSVWE 283
****************************************99999999888..59************************5 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MNLPSLRATE RFANQMILDA CRGAKRVHIV DYGILYGDQW PSLIKALSER AEGPPLLKIT 60 GIDFPSLVNL EKTGNRLVDY AKSCGMHLEF HSIATAAWES AQPRYHLFSE LLFVNCQLRM 120 RHIREDGIID SPRKLFLEKI LSFKPVMFFQ SVVHADIGSP FFIHRFDGAW RSFLARLESF 180 EETMKLELID QSQLDFMDKF IEKCAMGAIA CDGQNRVERI SSYKTWDRLA RKGQFGQLPV 240 SKRALEMVMS VWSGHENFTY GMDENWLLLG WKDVVLNALS VWEPIEKLPR FKHQ*
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